ggKbase home page

S28_scaffold_7461_curated_3

Organism: S28_Methanosarcina_42_8_curated

near complete RP 33 / 55 MC: 6 BSCG 23 / 51 MC: 3 ASCG 36 / 38 MC: 1
Location: 1291..1740

Top 3 Functional Annotations

Value Algorithm Source
Cell surface protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TNK1_METAC similarity UNIREF
DB: UNIREF100
  • Identity: 53.8
  • Coverage: 117.0
  • Bit_score: 114
  • Evalue 6.90e-23
Cell surface protein {ECO:0000313|EMBL:AKB78028.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.6
  • Coverage: 149.0
  • Bit_score: 268
  • Evalue 5.20e-69
cell surface protein similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 117.0
  • Bit_score: 114
  • Evalue 1.90e-23

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methanosarcina horonobensis → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 450
ATGTACGATCTTTCCACTTTTACGGAAACTAAGATCACAAACGATGGAGCAGTACAGAGCAGACCTGCTATCTATGGAGACAGGATCGTGTGGGAGGACTTCCGCAATCCTTCTGAAGGCAACAGTACCTTTTATATCCCGATCAAACCCGACATCTACATGTACGACCTCTCCACTTCCAGGGAAACCCAGATCACCACCAATGTACAGCAGGAAATGCCTGTTATCTACGGGGACAGGATTGTGTGGACAGATTATCGCAAAGGTGAACAAAACCCCGATATATACATGTGCACTATTTCAGGGGAGGGATCGGAAGCTGAAGTCTCAGGGGAGGGATCGGAAGCCGGACAGGAAAATAAACAGAGTGAAAGCCTGAGAACGCCTGGTTTTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTCTGTATAAAAAAAAGTAA
PROTEIN sequence
Length: 150
MYDLSTFTETKITNDGAVQSRPAIYGDRIVWEDFRNPSEGNSTFYIPIKPDIYMYDLSTSRETQITTNVQQEMPVIYGDRIVWTDYRKGEQNPDIYMCTISGEGSEAEVSGEGSEAGQENKQSESLRTPGFXXXXXXXXXXXXXLYKKK*