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S28_scaffold_6514_curated_1

Organism: S28_Methanosarcina_42_8_curated

near complete RP 33 / 55 MC: 6 BSCG 23 / 51 MC: 3 ASCG 36 / 38 MC: 1
Location: 2..1387

Top 3 Functional Annotations

Value Algorithm Source
Formate dehydrogenase alpha subunit {ECO:0000313|EMBL:AKB68234.1}; EC=1.2.1.2 {ECO:0000313|EMBL:AKB68234.1};; TaxID=1434114 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei LYC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 461.0
  • Bit_score: 907
  • Evalue 4.00e-261
Formate dehydrogenase alpha subunit (EC:1.2.1.2) similarity KEGG
DB: KEGG
  • Identity: 81.3
  • Coverage: 461.0
  • Bit_score: 786
  • Evalue 3.60e-225
Formate dehydrogenase, alpha subunit (F420) n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46C84_METBF similarity UNIREF
DB: UNIREF100
  • Identity: 81.0
  • Coverage: 453.0
  • Bit_score: 772
  • Evalue 1.40e-220
  • rbh

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Taxonomy

Methanosarcina mazei → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1386
AGAAATTTCGAGGAAATGAAAGCCGTGGTAATGCAGGAGACCTATTCTCTTCCAAACGTTTCAAAAATCACAGGAGTGCCTGAGGAGAACCTAAAAACCGCAGCCGAGTGGATTGCCCACTCAAAACCGTCTGCTCTCCTGTATTCAATGGGCATCACCCAGCATACGGTTGGGGTGGACAACGTGAGGTCCACAGCAAACCTTATGCTTCTGACCGGAAACCTCGGAGTCCCGGGAGGAGGGGTCAACCCTCTTAGGGGGCAGAACAATGTGCAGGGCGCATGCGATATGGGCTGCCTACCTGACGTGTATCCGGGCTACCGGAAGGTCACAGACCCGGAAAACCGCAGGAAAATGGAATCACTATGGAGCGTGAGCGGACTCCGGGAAGGGCCAGGGCTCACGGTCACGGAGCTGATGGAGCAGCTTTCTGAAGGAACGTCGGCTGTTAAATGCGTGTACAATATGGGAGAAAATTTCATACTCACCGACCCTGACATCAACAGGACAAAAAAAGCCCTGGAACACCTGGAATTCCTGGTCATGCAGGATATTTTCCTGAGCGAGACTGCAGAGCATGCTGACGTTGTCCTGCCTGCGGCCTGTTATGCAGAAAAGAACGGGACACAGACCAACACCGAGCGCCGGGTACAGCGGCTCCGGAAAGCCCTTGACCCTCCGGGTGAAGCTAAAGCAGACTGGAGCATAATTTGCGAAATTGCCGGATATATGGGATACGGGCCGCAGTTTTCCTACTCAAACGAATCAGAGATCTTTGAGGAAATTGCAAAGGCTACCCCCCAGTATGCGGGCATGAGTTACGGGCGCCTTGAAAACCCTGACGCTCTCCAGTGGCCCTGCCCTGAAAAAGACCATCCGGGAACGCCCATCCTGCATACCAAAAAGTTTGCCACACCTGACGGGCTTGGAGTGTTTTCCGGGGTTGAGTGGAAACCTCCTGCCGAAGTCCAGGATGCGGAATATCCCTTAATCCTTACCACAGGAAGGATCATCTGGCACTGGCATACCGGGACCATGACCCGCAGGTCGGAAACCCTGGACTCCGAAGTCAGGACCGGCTGGGTTGAGCTTAACCCGATGGATGCAAGAAGGCTGGGAATCAACAACCAGGAAAAAGTCCGCGTAATTTCCCGCAGGGGGGAAATAGTAATCCCTGCACTGGTCACGGATGACATAAAACCAGGGGTCGTCTTCATCCCCTTCCATTTCAAGGAATGTGCAGCCAACGTGCTGACAATCGGGGCTCTCGACCCCGTGGCAAAAATTCCGGAATACAAGGCATGTGCGGTAAAGATTGAGAAGATATTACCCGAAGAAGATAGAATAGAACTTGAAAAAAGCAAACTCTGGGAGGGTAAATTATGA
PROTEIN sequence
Length: 462
RNFEEMKAVVMQETYSLPNVSKITGVPEENLKTAAEWIAHSKPSALLYSMGITQHTVGVDNVRSTANLMLLTGNLGVPGGGVNPLRGQNNVQGACDMGCLPDVYPGYRKVTDPENRRKMESLWSVSGLREGPGLTVTELMEQLSEGTSAVKCVYNMGENFILTDPDINRTKKALEHLEFLVMQDIFLSETAEHADVVLPAACYAEKNGTQTNTERRVQRLRKALDPPGEAKADWSIICEIAGYMGYGPQFSYSNESEIFEEIAKATPQYAGMSYGRLENPDALQWPCPEKDHPGTPILHTKKFATPDGLGVFSGVEWKPPAEVQDAEYPLILTTGRIIWHWHTGTMTRRSETLDSEVRTGWVELNPMDARRLGINNQEKVRVISRRGEIVIPALVTDDIKPGVVFIPFHFKECAANVLTIGALDPVAKIPEYKACAVKIEKILPEEDRIELEKSKLWEGKL*