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S28_scaffold_4478_curated_3

Organism: S28_Methanosarcina_42_8_curated

near complete RP 33 / 55 MC: 6 BSCG 23 / 51 MC: 3 ASCG 36 / 38 MC: 1
Location: comp(1371..2108)

Top 3 Functional Annotations

Value Algorithm Source
Formate dehydrogenase chain D {ECO:0000313|EMBL:AKB63014.1}; EC=1.2.1.2 {ECO:0000313|EMBL:AKB63014.1};; TaxID=1434115 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei SarPi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.3
  • Coverage: 246.0
  • Bit_score: 408
  • Evalue 4.10e-111
FdhD protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PWS0_METMA similarity UNIREF
DB: UNIREF100
  • Identity: 83.7
  • Coverage: 246.0
  • Bit_score: 406
  • Evalue 1.40e-110
  • rbh
formate dehydrogenase subunit delta similarity KEGG
DB: KEGG
  • Identity: 83.7
  • Coverage: 246.0
  • Bit_score: 406
  • Evalue 4.10e-111
  • rbh

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Taxonomy

Methanosarcina mazei → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 738
ATGCCTGAGAAATACACCACACCTTACCCTGCCAGAAGAATCCATTCTAATGGCAGGGCTGAAGACACTGAATTGCTGCTCGCAAGGGAAGTCCCTGTTAAACTTTTTCTCGACGGGAGACAGTTTACGACTCTTTTTACTTCCCCGCTTGAATTGAAAGAGCTTGCAGTAGGCCACCTGGTTACGGAAGGAATTCTCGGCTTCAGGGAAATTGCAGGGATTGAGGTGGAAGGCGATGAGGTCCATGTCCTGACTCTAAAGGAAAAAGGTCCCATTCGGAAGGAATCCTCCCGGACGGCCGGAGAAACCGGAAAACAAATATTTGTTGATTCAGATGCTATTTTTGACCCGGAAGCTCTTTTTGCAGGCACAGGGAACCTTGAATCAGAGACATACAAACTTACCAGGGGCACCCACCTTGCCGCTCTTATAGACGGAAGAGGAAAACTAGCAGTCCGGATTGTTGATGTAGGCAGACATAATGCCGTAGACAAGGTGGTAGGGGCCGCCCTTCTCAGGGGGCTTGACATCTCACACCTGTACATGCTCTCCACAGGCAGACAACCCGCCTACATGATCACAAAAGCAGCTCGCGCAGGAATCCCCCTTGTCGCTACCAAAGCAATGCCCTTTGACTCCGGGGTTGAAGCTGCAAAAAAAGCAAATATGTGCCTTGTTGGGCAACTAAGGCTGGAATCAATGCTTGTCTTTGCCGGCGAGTGGCGGGTCCGGATTTAG
PROTEIN sequence
Length: 246
MPEKYTTPYPARRIHSNGRAEDTELLLAREVPVKLFLDGRQFTTLFTSPLELKELAVGHLVTEGILGFREIAGIEVEGDEVHVLTLKEKGPIRKESSRTAGETGKQIFVDSDAIFDPEALFAGTGNLESETYKLTRGTHLAALIDGRGKLAVRIVDVGRHNAVDKVVGAALLRGLDISHLYMLSTGRQPAYMITKAARAGIPLVATKAMPFDSGVEAAKKANMCLVGQLRLESMLVFAGEWRVRI*