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S28_scaffold_724_curated_3

Organism: S28_Methanosarcina_42_8_curated

near complete RP 33 / 55 MC: 6 BSCG 23 / 51 MC: 3 ASCG 36 / 38 MC: 1
Location: comp(2463..2612)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L40e n=2 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=RL40_METAC similarity UNIREF
DB: UNIREF100
  • Identity: 95.9
  • Coverage: 49.0
  • Bit_score: 101
  • Evalue 1.50e-19
50S ribosomal protein L40 {ECO:0000313|EMBL:KKG14285.1}; TaxID=1483597 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.T.1A.3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.0
  • Coverage: 49.0
  • Bit_score: 102
  • Evalue 1.20e-19
rpl40e; 50S ribosomal protein L40 similarity KEGG
DB: KEGG
  • Identity: 95.9
  • Coverage: 49.0
  • Bit_score: 101
  • Evalue 4.30e-20

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Taxonomy

Methanosarcina sp. 2.H.T.1A.3 → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 150
ATGGCTCGTTTTCCAGAAGCAGAAGAAAGATTATTAAACAAAAAGATCTGCATGAAGTGTAATGCCAGGAACGCTGTAAGGGCAACTCGCTGCAGAAAATGCGGCTACGGTGCTCTTCGTGTGAAATCCAAGGAATCCAAGGGAGCATGA
PROTEIN sequence
Length: 50
MARFPEAEERLLNKKICMKCNARNAVRATRCRKCGYGALRVKSKESKGA*