ggKbase home page

S28_scaffold_5771_curated_1

Organism: S28_Methanosarcina_42_8_curated

near complete RP 33 / 55 MC: 6 BSCG 23 / 51 MC: 3 ASCG 36 / 38 MC: 1
Location: comp(2..367)

Top 3 Functional Annotations

Value Algorithm Source
Thymidylate synthase (EC:2.1.1.45) similarity KEGG
DB: KEGG
  • Identity: 96.2
  • Coverage: 106.0
  • Bit_score: 213
  • Evalue 3.30e-53
Putative thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_01686}; Short=TS {ECO:0000256|HAMAP-Rule:MF_01686};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_01686};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_01686};; TaxID=1434111 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina lacustris Z-7289.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.2
  • Coverage: 106.0
  • Bit_score: 213
  • Evalue 1.60e-52
Putative thymidylate synthase n=2 Tax=Methanosarcina acetivorans RepID=TYSY_METAC similarity UNIREF
DB: UNIREF100
  • Identity: 96.9
  • Coverage: 97.0
  • Bit_score: 199
  • Evalue 1.30e-48

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methanosarcina lacustris → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 366
TTGAAAAGCACTTTCTCAATAATAAATTATTACGTTGATTATCCACCCTACCTTAACCTGAATGGGGAATTTTCTATGGAAGACAAATTTGAGATTGGCAGGATTATCAGGGCAAAGAACATCTCTGATGCATGGTACCGCGGGCTTAATATCATCTGGAATCACGGACAGGTGATTACCGACGAAAGGGGGAGCCAGATCAGGGAATTCATGGACTTGATGGTGGTAATCGAAGACCCCTATACGGATAGAATTCCCGAAGATACTGCCTGGAATGAAGAACGGCTCGAAGAATATGCAAAACAGCTGGTCTCGGGCGAAAACGTGCAGGACTTTGAATACACTTACGGTCAGCGCCTCAGGAAC
PROTEIN sequence
Length: 122
LKSTFSIINYYVDYPPYLNLNGEFSMEDKFEIGRIIRAKNISDAWYRGLNIIWNHGQVITDERGSQIREFMDLMVVIEDPYTDRIPEDTAWNEERLEEYAKQLVSGENVQDFEYTYGQRLRN