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S28_scaffold_887_curated_8

Organism: S28_Methanosarcina_42_8_curated

near complete RP 33 / 55 MC: 6 BSCG 23 / 51 MC: 3 ASCG 36 / 38 MC: 1
Location: 6279..6941

Top 3 Functional Annotations

Value Algorithm Source
Probable chemoreceptor glutamine deamidase CheD 2 n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=CHED2_METAC similarity UNIREF
DB: UNIREF100
  • Identity: 88.2
  • Coverage: 220.0
  • Bit_score: 390
  • Evalue 7.30e-106
  • rbh
Chemotaxis protein CheD {ECO:0000313|EMBL:KKH99745.1}; TaxID=1483602 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 1.H.T.1A.1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.0
  • Coverage: 220.0
  • Bit_score: 397
  • Evalue 8.40e-108
cheD1; chemoreceptor glutamine deamidase CheD similarity KEGG
DB: KEGG
  • Identity: 88.2
  • Coverage: 220.0
  • Bit_score: 390
  • Evalue 2.10e-106
  • rbh

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Taxonomy

Methanosarcina sp. 1.H.T.1A.1 → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 663
ATGAGTAGCAATATTTTATTCGTCTCGAATGAACATGGGAAAGTGATTTTTTTAACCAGCAGGGATGTACTGGTGAAATCTTTTTGTTCACTTTCAAATACCTGCTCATTTCAGGACTCTTGCCGATCATGTGATATGGTTAATGCTGCAAAAAGTCACCTGATGGGCACCAGATCAAATTTGAACATTAAAAACCTGGACGGAGAACTATCTGCCGGGATAGGAGAATACAAGATCGGGAAAAATGTCCTCTTAAAAGTAATGGGACTGGGCTCCTGTATTGGCGTTATTCTTTCCGATGTTTCAACAGGCCTGTGCGGAATAGCGCACGTGCTGCTTCCCGGGGCTTCAAATAACGGCGAAACCAAGTATGCAGAAACAGCCATAGAAAAAATGTTTGAAGATATGATAAAAATGGGGGCAAGGAAAAACAGGATTACTGCAAAGTTTGCAGGAGGTGCCCAGGTTTTTAAGCATATGAATCTGGACATTCTCAAAATTGGCGATAGAAATGCGATATCTGTTGAAGAAACTCTGATTAAAAGAAATATCCCGATTCTTGCAAAAGATGTGGGCGGGGAAGTCGGCAGGAACGTTATTTTTAATCCTGCAGACGGCAGCATGATTGTCAAATATACTAAAGGGGAAGTACTGTGGTTGTAA
PROTEIN sequence
Length: 221
MSSNILFVSNEHGKVIFLTSRDVLVKSFCSLSNTCSFQDSCRSCDMVNAAKSHLMGTRSNLNIKNLDGELSAGIGEYKIGKNVLLKVMGLGSCIGVILSDVSTGLCGIAHVLLPGASNNGETKYAETAIEKMFEDMIKMGARKNRITAKFAGGAQVFKHMNLDILKIGDRNAISVEETLIKRNIPILAKDVGGEVGRNVIFNPADGSMIVKYTKGEVLWL*