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S28_scaffold_1955_curated_2

Organism: S28_Methanosarcina_42_8_curated

near complete RP 33 / 55 MC: 6 BSCG 23 / 51 MC: 3 ASCG 36 / 38 MC: 1
Location: comp(509..1465)

Top 3 Functional Annotations

Value Algorithm Source
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=213585 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei S-6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.0
  • Coverage: 318.0
  • Bit_score: 614
  • Evalue 8.30e-173
CRISPR-associated endonuclease Cas1 n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B9F5_METTP similarity UNIREF
DB: UNIREF100
  • Identity: 68.6
  • Coverage: 318.0
  • Bit_score: 459
  • Evalue 1.40e-126
  • rbh
CRISPR-associated Cas1 family protein similarity KEGG
DB: KEGG
  • Identity: 68.6
  • Coverage: 318.0
  • Bit_score: 459
  • Evalue 4.00e-127
  • rbh

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Taxonomy

Methanosarcina mazei → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 957
GTGATTTATGTGACAAAGCAGGGGTCAACTGTCGGGATAGATGGAGGGCGCATTTCTGTTTACCAGAAAGAAGAGGGTGAACTGGCATCCTATCCTATCGGAAAGGTAAGTACAATTAATATTTTCGGTAACGTTAATTTTACCACTCCATTTGTTGCGCAGGCAAATGAGCACGGTGTTACACTAAATTACTTTAATTTTTATGGGAAATACAGGGGTAGCTTTATACCGGAACGTAACACCATTGCTGAAGTCCGAAGGAAACAGTATGCTCTTACAGAACCCCAGAGCCTTGCAATTGCCCAAAAGATAATCTCTGGAAAGATCCGAAACTCAAGAACACTTTTGAGCCGGAAAGGTATAAAAGAGCTTAAAAAACTGGATGAAATTGAGTCAAAAACGACTGAAGCTGGCACTCCTGATGAACTGAGAGGTTACGAAGGCGAGGCAGCAGAGTTTTACTTTAAGCACCTCAATAATTGCCTGATAGACGGCTGGACTTTTGAGAAGAGAACAAAAAGACCTCCTGAGGATCATATCAATGCTCTCATGTCACTAACATATACAATGATGAAAAACGAAGTTTTGAGTGCACTTAGACAGTATAATCTAGATCCTTACTTGGGAGTCTTTCATGCCGACAGACACGGCAAGCCCGCGCTTGCACTTGATTTAATGGAAGAGTTTCGACCGCTATTCTGTGACGCATTTGTGTTGAGATTGATTAACCGTAAAGAATTGACACATGATGATTTCCAGGTAGATAACCACCTGAAAGAACATCCGTTTAAAACATATCTTGCTAAATTTGATGAATATATGAAAGAAGAATTTATGCATCCTCATTTCAAATATCAGGTCTCCCGCAGAAAAGCGATCAGGATGCAGGCAATATTACTAAGAAAAGCGATCACAGATGAACTTCCTATGTATTATCCTCTGGTGTTTAAACGATGA
PROTEIN sequence
Length: 319
VIYVTKQGSTVGIDGGRISVYQKEEGELASYPIGKVSTINIFGNVNFTTPFVAQANEHGVTLNYFNFYGKYRGSFIPERNTIAEVRRKQYALTEPQSLAIAQKIISGKIRNSRTLLSRKGIKELKKLDEIESKTTEAGTPDELRGYEGEAAEFYFKHLNNCLIDGWTFEKRTKRPPEDHINALMSLTYTMMKNEVLSALRQYNLDPYLGVFHADRHGKPALALDLMEEFRPLFCDAFVLRLINRKELTHDDFQVDNHLKEHPFKTYLAKFDEYMKEEFMHPHFKYQVSRRKAIRMQAILLRKAITDELPMYYPLVFKR*