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S28_scaffold_863_curated_8

Organism: S28_Methanosarcina_42_8_curated

near complete RP 33 / 55 MC: 6 BSCG 23 / 51 MC: 3 ASCG 36 / 38 MC: 1
Location: comp(7669..8229)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent RNA helicase n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PVP5_METMA similarity UNIREF
DB: UNIREF100
  • Identity: 91.5
  • Coverage: 189.0
  • Bit_score: 335
  • Evalue 3.10e-89
Putative ski2-type helicase {ECO:0000313|EMBL:AKB79940.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 186.0
  • Bit_score: 340
  • Evalue 7.90e-91
ATP-dependent RNA helicase similarity KEGG
DB: KEGG
  • Identity: 93.7
  • Coverage: 189.0
  • Bit_score: 335
  • Evalue 8.80e-90

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Taxonomy

Methanosarcina horonobensis → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 561
AGAGCAAAAGAAGTCCTGACGAAACTCGCAGCCGGCGAAATAGCAGTCGAGGTCTCGGGTCCAACTCCAATAGGCTCAGCCGGCTTTGCCATGAAAAGAGACCTTGTAGCTCCGGAAAAAGCTGACCGTTCAATCGTGCTTnnnnnnnnnnnnnnnnnCATGAACGACCACATTATCCTCTTCTGCACGACCTGCAAGAAATGGACCTCCCACCGCCAGGTGAAAAGCGTCCCGGAAGAAATTGTCTGCCCGGTCTGTGAGTCTCAGATGATTGCAGCCCTCAAGCCCTGGGAAGAAGAGGAAATCAACCTTGTCAAAAAGCAGGGTAGAAATGTCAAAGTTTCTCCCGAAGAAAAGAAGCGGATACAGAGAGTTTACAGGAATGCAAGCATAGTCCGCTCGCAGGGGAAGAAGGCGGTTATTGCGCTTGCCAGCAGGGGGATTGGACCTGAGACGGCGTCAAGGGTTATTGAGAAGATGAGGGTGGACGAAGAGGCGTTTTACAGGGATATTCTGATTGCGGAGAGGAATTATGTGAAGACGAAGAAGTTCTGGGAATGA
PROTEIN sequence
Length: 187
RAKEVLTKLAAGEIAVEVSGPTPIGSAGFAMKRDLVAPEKADRSIVLXXXXXXMNDHIILFCTTCKKWTSHRQVKSVPEEIVCPVCESQMIAALKPWEEEEINLVKKQGRNVKVSPEEKKRIQRVYRNASIVRSQGKKAVIALASRGIGPETASRVIEKMRVDEEAFYRDILIAERNYVKTKKFWE*