ggKbase home page

S28_scaffold_6009_curated_1

Organism: S28_Methanosarcina_42_8_curated

near complete RP 33 / 55 MC: 6 BSCG 23 / 51 MC: 3 ASCG 36 / 38 MC: 1
Location: 3..773

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, ATP-binding protein n=1 Tax=uncultured archaeon RepID=D1JGE6_9ARCH similarity UNIREF
DB: UNIREF100
  • Identity: 65.5
  • Coverage: 255.0
  • Bit_score: 342
  • Evalue 2.00e-91
  • rbh
Iron ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKG23558.1}; TaxID=1483598 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.T.1A.8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.6
  • Coverage: 255.0
  • Bit_score: 455
  • Evalue 3.00e-125
Vitamin B12 ABC transporter, ATPase component BtuD similarity KEGG
DB: KEGG
  • Identity: 86.7
  • Coverage: 255.0
  • Bit_score: 441
  • Evalue 1.60e-121

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methanosarcina sp. 2.H.T.1A.8 → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 771
AAATTGAAGGTAAACAACATTGAATTTGCTTATAACAGTGTACATGTTCTTGAAAACGTGTCAATGGAACTGAACAGCAAAGAAGTTCTCGGTATTGTAGGCCCGAATGGTACCGGCAAATCCACCCTGATCCGGTGTATTGACAAGATACTGAATCCTAAAAGAGGAAGCATATTACTGGATGAGCAAAATATCAGTAAGATGAGCAGGATGGAGATTGCAAGGAAAATTGGCTACGTACCGCAGAGCATGAAAGGTATTTTTCCTGCTTCTGTTGTCGATACCGTTCTTATGGGCAGACGCCCCTACCTTGGATGGAAGAGTAGTCAGGAAGACCTGGATTGCGTACTGGAAGTTCTGGAACTGCTCGGGCTGATGGAATTTGCCATGAGAGATATTAACGAAATTAGCGGAGGCCAGCAGCAGAAGGTTCTTATCGCACGGGCACTTGCACAGAAGGCAGATATTCTTCTTCTTGACGAGCCAACCAGCAATCTTGATATAAAGCACCAGCTCGAGGTCATGGAAATCATGAAGAACATTGTAAAGAATAAAGGAATTTCTGCGATCATGGCGCTTCATGATTTGAATCTGGCTTCGAGATATGCCGATAGAATAATCATGATGAAGGAGGGCAAAATATTCGCAGTTGGGAACCCTGCTTCAGTCCTCACCGTGGAAAATATAAAACAGGTCTATGGTGTACAGGCTCTGGTAAAAGATGATGGAAAAAGGCCATATATTATCCCGATAGGGCCTGTTACAGTTTAA
PROTEIN sequence
Length: 257
KLKVNNIEFAYNSVHVLENVSMELNSKEVLGIVGPNGTGKSTLIRCIDKILNPKRGSILLDEQNISKMSRMEIARKIGYVPQSMKGIFPASVVDTVLMGRRPYLGWKSSQEDLDCVLEVLELLGLMEFAMRDINEISGGQQQKVLIARALAQKADILLLDEPTSNLDIKHQLEVMEIMKNIVKNKGISAIMALHDLNLASRYADRIIMMKEGKIFAVGNPASVLTVENIKQVYGVQALVKDDGKRPYIIPIGPVTV*