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S28_scaffold_2836_curated_1

Organism: S28_Methanosarcina_42_8_curated

near complete RP 33 / 55 MC: 6 BSCG 23 / 51 MC: 3 ASCG 36 / 38 MC: 1
Location: comp(3..470)

Top 3 Functional Annotations

Value Algorithm Source
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=188937 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /; C2A).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.4
  • Coverage: 156.0
  • Bit_score: 284
  • Evalue 5.60e-74
GDP-mannose 4,6-dehydratase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TRK1_METAC similarity UNIREF
DB: UNIREF100
  • Identity: 90.4
  • Coverage: 156.0
  • Bit_score: 284
  • Evalue 4.00e-74
gmd; GDP-mannose 4,6-dehydratase similarity KEGG
DB: KEGG
  • Identity: 90.4
  • Coverage: 156.0
  • Bit_score: 284
  • Evalue 1.10e-74

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Taxonomy

Methanosarcina acetivorans → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 468
TTGACAAAGGTCGCACTGATCACAGGCATAACAGGCCAGGATGGCACGTATATTTCAAAACTTTTATTAGATAAGGGATATGTAGTGCATGGGATAAAGAGAGAATCTTCTACTGCCAGAACAGAAGATAAAGGTGGTGCGCAGAAAAACATAAATCTTCACTTTCACTTCTGCGACATAACCGATTACTCAAAGATTATAAGAATTATCAAAGAGGTCCGCCCGGATGAAATATATAATCTGGCGGCTCAAAGCAATGTACAGATCTCTTTTGACCGACCAGAATATACAGCAGAAATTAACGCACTCGGCACCCTGCGCCTCCTTGAAGCCATACGCACCCTTGGACTGGAAAAGAAAACAAGGTTTTTTCAGGCTTCCACGGGAGATTTATTCGGAAATTCGCTGGAGATCCCGCAAAATGAAAGTACTCCTTTCTACCCTCGAAACCCTTATGCAGTGTCCAAA
PROTEIN sequence
Length: 156
LTKVALITGITGQDGTYISKLLLDKGYVVHGIKRESSTARTEDKGGAQKNINLHFHFCDITDYSKIIRIIKEVRPDEIYNLAAQSNVQISFDRPEYTAEINALGTLRLLEAIRTLGLEKKTRFFQASTGDLFGNSLEIPQNESTPFYPRNPYAVSK