ggKbase home page

S28_scaffold_11574_curated_1

Organism: S28_Methanosarcina_42_8_curated

near complete RP 33 / 55 MC: 6 BSCG 23 / 51 MC: 3 ASCG 36 / 38 MC: 1
Location: comp(1..831)

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretion system protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TJ15_METAC similarity UNIREF
DB: UNIREF100
  • Identity: 61.9
  • Coverage: 291.0
  • Bit_score: 334
  • Evalue 6.00e-89
type IV secretion system protein similarity KEGG
DB: KEGG
  • Identity: 61.9
  • Coverage: 291.0
  • Bit_score: 334
  • Evalue 1.70e-89
Type IV secretion system protein {ECO:0000313|EMBL:AAM07324.1}; TaxID=188937 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /; C2A).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.9
  • Coverage: 291.0
  • Bit_score: 334
  • Evalue 8.40e-89

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methanosarcina acetivorans → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 831
ATGCGTAAAGGTGAGGGAAAGTATGTTCTGGCAGGGAAATCCTGTCTCTTACAGGTGCCTGTCAAAAGGACTTCTTATGAAGATGCTCAAAATATAGCTAACATTAACCGCCTTGAAGTTGATAACGACAACAGGAATATAGTAAATATTCTTCAGGAAGCTTCAGGAACTGATATTACAGGGAATGAAAGTACAGAAAGCGAGGATGCCAGCCTTCCTGATATGAAAATCAAGATTGAAAGCAGGAAAACCAAACATGTACTCGAAACCGTTAAGTTTACTAGTTTTTCTCCAAAAACCGAGGACGAGGAAGAGCTGGTAAATAAATGTGTATCGGAAACTCCTCTGTTTGTAGACGAATCTGATATTCAAAAAACCACCTCTCTTGAAAAAAGTTCGAGTCTTGAACTGAAAACTTCCGTTTCTGCAGAAGTCACTCTGGAATCAAAACCCACTATTTCTACAGAAGTGGCTCCTGAAAAGAAAGTTGAACTTATCCTCGAAACTGAAAACAAAGGTATTTTCCCCCCTGCAGCCGGGTCTAACAGTGAGGAAATTACAGGTCATAAAGATGGAGCTGAAGAACnnnnnnnnnCTCAGAAAGCAGAAAAGGATAAAAAAGTAAGAACTTCAGGTAAAATTAAAAAAGCTCCCCAAAAAGCGAAAATTAAGAAAAAGCCCGGATTCTTAGGGAATATGAAGGATTTGGGTCGCGATATAGCTGGGATCAAAGAAGGCGAAAAATTAAGTGACAAGCTTAAAGAGTTCTTCAATGAAGTAAAAACCCCTGAAGGAGCAAAAAAGAAGTTCACAGAAATCGTCCGGAGTCTG
PROTEIN sequence
Length: 277
MRKGEGKYVLAGKSCLLQVPVKRTSYEDAQNIANINRLEVDNDNRNIVNILQEASGTDITGNESTESEDASLPDMKIKIESRKTKHVLETVKFTSFSPKTEDEEELVNKCVSETPLFVDESDIQKTTSLEKSSSLELKTSVSAEVTLESKPTISTEVAPEKKVELILETENKGIFPPAAGSNSEEITGHKDGAEEXXXXQKAEKDKKVRTSGKIKKAPQKAKIKKKPGFLGNMKDLGRDIAGIKEGEKLSDKLKEFFNEVKTPEGAKKKFTEIVRSL