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S28_scaffold_3027_curated_2

Organism: S28_Methanosarcina_42_8_curated

near complete RP 33 / 55 MC: 6 BSCG 23 / 51 MC: 3 ASCG 36 / 38 MC: 1
Location: comp(518..1096)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TTQ8_METAC similarity UNIREF
DB: UNIREF100
  • Identity: 89.1
  • Coverage: 192.0
  • Bit_score: 315
  • Evalue 2.00e-83
  • rbh
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 89.1
  • Coverage: 192.0
  • Bit_score: 315
  • Evalue 5.70e-84
  • rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AAM03820.1}; TaxID=188937 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /; C2A).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.1
  • Coverage: 192.0
  • Bit_score: 315
  • Evalue 2.80e-83

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Taxonomy

Methanosarcina acetivorans → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 579
ATGAAAGAACAAATCAAAGACAAAAGAAAAGCCATTCTGGAAGCAGCCTTGAAGCTCTTCACTGAAAGAGGCTTTCATGGTACATCCACTGCTCAGATATCAAAAGAAGCAGGTGTAGCCACAGGCACCCTTTTTAATTACTTTCCCACAAAAGAAGACCTTATAAACAGCCTGTATTTTGAAGTTAAAGGAAACTTAAGCCACGCTATGGGGAAAGATCTTGAAGCTGAGGGCACCTTTCAGGGTAAATTAAGGAAAATATGGTCAAATTTAGTCAAATGGGGAGTAGACAATCAGGAAGAATTCCTTTTTGTCGGACAATTCTGCTCATCCCCCTATATCACAAAGTTTACGCGTGAAGAAGTAATGAAAGAGTATGTCTTTCTTCATGATCTTGTGGATGAAGGAATAAAAATGGGAGAGATCAGAGATTTTCCTGCGGAGCTGGTCATTGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTTGATTCGGATCCGTCACAGGATGAAAATAAAGTTTTAGAGGATGGATTCCAGATTCTCTGGAAAGGTCTAGCTAAAAAATAA
PROTEIN sequence
Length: 193
MKEQIKDKRKAILEAALKLFTERGFHGTSTAQISKEAGVATGTLFNYFPTKEDLINSLYFEVKGNLSHAMGKDLEAEGTFQGKLRKIWSNLVKWGVDNQEEFLFVGQFCSSPYITKFTREEVMKEYVFLHDLVDEGIKMGEIRDFPAELVIXXXXXXXXXXXXXXXDSDPSQDENKVLEDGFQILWKGLAKK*