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S28_scaffold_9758_curated_2

Organism: S28_Methanosarcina_42_8_curated

near complete RP 33 / 55 MC: 6 BSCG 23 / 51 MC: 3 ASCG 36 / 38 MC: 1
Location: comp(680..1498)

Top 3 Functional Annotations

Value Algorithm Source
Tryptophan synthase subunit beta {ECO:0000313|EMBL:KKH92114.1}; EC=4.2.1.20 {ECO:0000313|EMBL:KKH92114.1};; TaxID=1483602 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 1.H.T.1A.1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.3
  • Coverage: 272.0
  • Bit_score: 538
  • Evalue 3.80e-150
Tryptophan synthase beta chain 1 (EC:4.2.1.20) similarity KEGG
DB: KEGG
  • Identity: 94.9
  • Coverage: 272.0
  • Bit_score: 531
  • Evalue 1.20e-148
Tryptophan synthase beta chain 2 n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=TRPB2_METAC similarity UNIREF
DB: UNIREF100
  • Identity: 93.0
  • Coverage: 272.0
  • Bit_score: 528
  • Evalue 2.10e-147
  • rbh

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Taxonomy

Methanosarcina sp. 1.H.T.1A.1 → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 819
CGTTCCAGTTACTACCAGAAACCTTACAGAAAATCCCTTATGACCCTCTGGGGAGGAAATGTCGTGCCTTCTCCAAGCCCGGATACGGAGTTCGGAAGAAAGATCCTTCAAGAGCAGCCTGATACTCCCGGAAGCCTCGGGATCGCAATTAGTGAGGCTGTAGAGGATGCCGTAGCCCATGAGAACACAAAGTATGCCCTTGGAAGTGTGCTTAACCACGTTGTGCTCCACCAGACCGTAATAGGGACTGAGTGCAAAAAGCAGCTTGAGCAGGTAGAAGAATATCCTGATGTGGTTATCGGGTGCTGCGGCGGCGGGAGCAACCTCGGAGGAATTGGGCTTGAGTTTATAAAAGATAGGCTTGAGGGAAAACACAACGCAAGAGTGGTAGCAGTCGAACCCTCGTCCTGCCCTTCCCTGACAAAAGGAGAGTACAGGTATGACTTCGGAGACACTGCCGAGATGACACCGCTCCTTAAAATGTACACCCTCGGACACAAGCACACACCACCTGCCATCCATGCAGGAGGGCTACGCTACCACGGCGACTCTCCGATTATAAGCAAGCTATGTGCAGAAGGGCTTATAGAAGCTGTTTCATATGACCAGTACAATGTTTTTGATGCAGCCGTACAGTTTGCCAGGACAGAAGGAATAGTGCCTGCACCTGAATCTGCCCACGCTATTCGCTGTGCAATCGACGAAGCCATTGCAGCCAAACAGACAGGAGAAAAAAAGACTATTCTCTTCAACCTGAGCGGGCACGGGCACTTTGACATGGCCTCTTATGACAAATATTTCAGCGGAGAACTCGTCTGA
PROTEIN sequence
Length: 273
RSSYYQKPYRKSLMTLWGGNVVPSPSPDTEFGRKILQEQPDTPGSLGIAISEAVEDAVAHENTKYALGSVLNHVVLHQTVIGTECKKQLEQVEEYPDVVIGCCGGGSNLGGIGLEFIKDRLEGKHNARVVAVEPSSCPSLTKGEYRYDFGDTAEMTPLLKMYTLGHKHTPPAIHAGGLRYHGDSPIISKLCAEGLIEAVSYDQYNVFDAAVQFARTEGIVPAPESAHAIRCAIDEAIAAKQTGEKKTILFNLSGHGHFDMASYDKYFSGELV*