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S28_scaffold_1335_curated_5

Organism: S28_Methanosarcina_42_8_curated

near complete RP 33 / 55 MC: 6 BSCG 23 / 51 MC: 3 ASCG 36 / 38 MC: 1
Location: 3087..4514

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide O-side chain biosynthesis protein (O-antigen transpoter) n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FX4_METBF similarity UNIREF
DB: UNIREF100
  • Identity: 71.6
  • Coverage: 476.0
  • Bit_score: 675
  • Evalue 2.50e-191
  • rbh
Membrane protein involved in the export of O-antigen, teichoic acid lipoteichoic acids {ECO:0000313|EMBL:AKB77259.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.7
  • Coverage: 475.0
  • Bit_score: 714
  • Evalue 8.80e-203
Membrane protein involved in the export of O-antigen, teichoic acid lipoteichoic acids similarity KEGG
DB: KEGG
  • Identity: 71.6
  • Coverage: 476.0
  • Bit_score: 675
  • Evalue 7.00e-192

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Taxonomy

Methanosarcina horonobensis → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1428
TTGACTACAGTTCAAAGCATAGCCAAGAACAGTTTATTTTTGCTTTCTGGTCAAATCATAAGTATAGTTTTTGGCTTCTTTTATTTTATTTATATGGCCCGGTACCTTGGGGCTGAGGACCTGGGAATACTGAGTTTTGCACTCTCTTTTACCATAATCATCGGACTTTTAGGAGATCTTGGATTAAGTTCATTAATGACAAGAGAAGTCTCACGTAATCAATCCCTGGCTTCTAAGTATCTTGGGAATATTCTTCTAATAAAAGTCCTTCTAGCTGTAGCCACCTTTGGAGTTGTTGTAATTGTAATAAATGTTCTTGATTATTCTGAACATACAATAAAAATAGTTTACATTATTACGGTATCCAATATTTTAGCAAACTTCACTCAGATTTTTAATTCCATATTTCAAGCGTTTGAAAGACTTGAATACCTATCCATCGGAATAATACTAACCAGTACACTAATGCTTATAGGCATTTCTTTTGCAGTAGAGCAGAACTTCGATTTAATTTATTTTGCATTTGTTTATCTTGTTGTAAATGCAATTGTGCTTGCATATAGCCTTTTTATTTGTCTCATAAAATTTGCAGTGCCGAATTTAAAAATTGATTGGACCTTCTGGAAGCAGATAATCTTAGAATCGTTGCCTTTCTGGTTAAACAGTGTTTTTGTTATAATTTACTTTAAAATTGACATGGTAATGCTTTCGACAATGGACGGGGATACGGTAGTTGGATGGTATGCAGCGTCTTACAGGTTAATAGATGCTCTTGGCTTCATTCCTGCAGTCCTTATGAGTACCATGTATCCTGTATTTTCCAAATTCCATATTAGCTCAAAAGACTCCCTGGAATTTGCATTCAGAAAATCATTTAAAATTTTAGCAATAATCGCAATTCCCATTGGTATAGGAACTACACTTCTTGCAGAAAGAATTATTGTACTTATATATGGTGTAGAGTATACTCCTTCGGTTATTGTTTTGCAAATTCTAATATGGGCGAGTGTATTGAGCTTTATTAATTATACTCCTGCAACTTACCTAACTTCTACAGATAAACAAAGGGTGCTTATGATTTTTACCTGTTTGGGAGCAATTTTTAATATTATTTTAAATTTCATTTTAATTCCATTGTTTAGCTATAATGGAGCTGCTATTGCGACAGTTTCCACAGAACTCATTGTAGGGATACTCATGCTTCATAAGGTCCATAGGATACAGAATTTATCCACTTTATTATCTGACGTCATTCTTAAATCGTTAATTGCGGGAGCTTTCATGGGTATATTTATATTAATTTTCAAGGATTATACATTAATATTGTTGATTCTTTTCTCAGCAATCCTTTACCTCATTGCACTGTACATTGTAAATGGTTTCGAAAAAGAGGATATCAACTTATTTAATCAAGTATTGGGACGGTAA
PROTEIN sequence
Length: 476
LTTVQSIAKNSLFLLSGQIISIVFGFFYFIYMARYLGAEDLGILSFALSFTIIIGLLGDLGLSSLMTREVSRNQSLASKYLGNILLIKVLLAVATFGVVVIVINVLDYSEHTIKIVYIITVSNILANFTQIFNSIFQAFERLEYLSIGIILTSTLMLIGISFAVEQNFDLIYFAFVYLVVNAIVLAYSLFICLIKFAVPNLKIDWTFWKQIILESLPFWLNSVFVIIYFKIDMVMLSTMDGDTVVGWYAASYRLIDALGFIPAVLMSTMYPVFSKFHISSKDSLEFAFRKSFKILAIIAIPIGIGTTLLAERIIVLIYGVEYTPSVIVLQILIWASVLSFINYTPATYLTSTDKQRVLMIFTCLGAIFNIILNFILIPLFSYNGAAIATVSTELIVGILMLHKVHRIQNLSTLLSDVILKSLIAGAFMGIFILIFKDYTLILLILFSAILYLIALYIVNGFEKEDINLFNQVLGR*