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S28_scaffold_1238_curated_7

Organism: S28_Methanosarcina_42_8_curated

near complete RP 33 / 55 MC: 6 BSCG 23 / 51 MC: 3 ASCG 36 / 38 MC: 1
Location: 3753..5468

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent RNA helicase n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PYV4_METMA similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 572.0
  • Bit_score: 894
  • Evalue 4.10e-257
  • rbh
Cold-shock DEAD-box protein A {ECO:0000313|EMBL:AKB19146.1}; TaxID=1434103 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. WWM596.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.3
  • Coverage: 575.0
  • Bit_score: 927
  • Evalue 4.70e-267
ATP-dependent RNA helicase similarity KEGG
DB: KEGG
  • Identity: 88.6
  • Coverage: 572.0
  • Bit_score: 894
  • Evalue 1.10e-257
  • rbh

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Taxonomy

Methanosarcina sp. WWM596 → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1716
TTGAAAGCCCTCAAAAAGAAAGGGTTTGAAGAACCAACCCCGATTCAGGAAAAGGTCATCCCGCTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAGGCACAGGAAAAACGACAGCCTTTGGAGCCCCCATTATAGAAAAAATTCCAGAGAAATCAGGACACGTTCAGGCAATAATCCTGACCCCTACAAGGGAACTCGCAATCCAGGTTTCAGAAGAGCTTAACTCCATAAAAGGAGATAAAAAGCTATTCATCGTCCCTATATATGGCGGGCAGTCCATGACCCAGCAGCTTCGTGTGCTGAAAACCGGTGTGGACATCGTCGTCGGGACCCCTGGAAGGGTCATTGACCACCTCGAAAGAAAAAGCCTCAACCTTGAACATATCGCGTATTTCGTACTTGACGAAGCCGACGAAATGTTGAACATGGGCTTTATTGATGACATAAAGGAAATCTTAAAGGCAACAGGGCCGAATAAAAGGATGCTTTTCTTTTCAGCCACAATGCCAAAAGCGATCCTTGGAATCGTCAAGAAGTACATGCAGAACTACGAGCATATTACAATTGAGAAAGAAGAGCTTACTGCAAACCTGACCGAACAGATCTATTTTGAAGTTCAGGAAAGCGATAAGTTTGAAGCTCTCAGCAGAATTATCGATATCGAAGACGAATTCTACGGGCTCGTTTTCTGCCGGACAAAAACCGACACCAGCCAGCTTGCCCAGAAACTCAGCGACAGAGGTTATTTAGCCGATGCCCTGCATGGAGACCTCTCCCAGCAGGAGCGGGAGAAAATCCTGAATAAGTTCAGGAAGCAGAAAATAAATATTCTCGCAGCAACCGATGTTGCAGCAAGAGGCATCGATATCATGGACCTGACCCATGTCATCAACTATTCCCTGCCCCAGGACCCTGAGTCCTATGTGCACAGGATAGGAAGGACAGGAAGGGCAGGCAAACAGGGAACTGCTAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnACCTACATAAAAAAGACTTCAAAGTCCGAAATGAAAAAGGGCCGCCTCCCCGAAATAAAAGATGTAATAAAAGCCAAAAGGACGAGAGTAAAAGCCGAACTTGAAGATACTATAAAGACAGAAGAATACGGCGACTGCCTTGAGATGAGCGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCTGCCCTTTTAAAGTACGCCTTCAAGGAAAAGTTCGATGAGAGCATGTACACGGAGATTTCCGGCGGCAGCTCCTATGTTGACAGAAAAGGCAAAACCAGGCTATTCATAGCTATGGGAAAAGTCGACGGTATGACCCCGGAAAAACTGGCATATTTCATCCAGGAAGAACTCGGGGACAGCGAACTGAACATAAGGGACGCAGAGATTTTCCCGCACTTTTCATTCGTATCCATCCCCTTTGCCCAGGCTGAAGCCCTGCTCGAAATCTTCAAAAACAAGAGAAGAGGAAGTAAACCCTTTGTGGAACTTGCCCAGAAATCCAGGGGAAGAAGCTCCGGCAGTCCAAATAACGGAAGCAGCAGAAGCGATGGAAGCGGAGGAAGCAGTAGAAGCGGAGGAAGCAGTAGAAGCGGGGGAAGCAGAAGCGGTGGAAGCAGCGGAAGCAGCGGAAGTGGTGGAAATAGGCCCAGAAGCGAAAGCAGGCCAAGAAGTACGAAAAAATAA
PROTEIN sequence
Length: 572
LKALKKKGFEEPTPIQEKVIPXXXXXXXXXXXXXXXGTGKTTAFGAPIIEKIPEKSGHVQAIILTPTRELAIQVSEELNSIKGDKKLFIVPIYGGQSMTQQLRVLKTGVDIVVGTPGRVIDHLERKSLNLEHIAYFVLDEADEMLNMGFIDDIKEILKATGPNKRMLFFSATMPKAILGIVKKYMQNYEHITIEKEELTANLTEQIYFEVQESDKFEALSRIIDIEDEFYGLVFCRTKTDTSQLAQKLSDRGYLADALHGDLSQQEREKILNKFRKQKINILAATDVAARGIDIMDLTHVINYSLPQDPESYVHRIGRTGRAGKQGTAXXXXXXXXXXXXTYIKKTSKSEMKKGRLPEIKDVIKAKRTRVKAELEDTIKTEEYGDCLEMSXXXXXXXXXXXXXXALLKYAFKEKFDESMYTEISGGSSYVDRKGKTRLFIAMGKVDGMTPEKLAYFIQEELGDSELNIRDAEIFPHFSFVSIPFAQAEALLEIFKNKRRGSKPFVELAQKSRGRSSGSPNNGSSRSDGSGGSSRSGGSSRSGGSRSGGSSGSSGSGGNRPRSESRPRSTKK*