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S28_scaffold_1158_curated_5

Organism: S28_Methanosarcina_42_8_curated

near complete RP 33 / 55 MC: 6 BSCG 23 / 51 MC: 3 ASCG 36 / 38 MC: 1
Location: comp(4492..4830)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, PadR family n=1 Tax=Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9) RepID=F5Y6T2_TREAZ similarity UNIREF
DB: UNIREF100
  • Identity: 75.7
  • Coverage: 107.0
  • Bit_score: 173
  • Evalue 7.20e-41
Transcriptional regulator, PadR family {ECO:0000313|EMBL:AKB78596.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 112.0
  • Bit_score: 232
  • Evalue 1.80e-58
PadR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 75.7
  • Coverage: 107.0
  • Bit_score: 173
  • Evalue 2.00e-41

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Taxonomy

Methanosarcina horonobensis → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 339
ATGGAGCCGAAATTGTCATCGGATTTGCTCCGAGGCCACACGGAAACCATAGTGCTTGGAATCCTGCTTAAGCGGGATATGTACGGCTTTGAAATCTACAACACGATTTTGGAACGTACCGGCGAGAAGTACGAATTGAAAGAAACTACGTTGTATTCAAGCTATAAGCGGCTTGAAAAAGAAGGCTGCATCACCTCGTATTGGGGCGACGAAACACAGGGAGCCAGAAGGAAATACTACCGTATCACGGAGAAAGGCTGTGAACTCTACCAGCAGAACAAATTGGACTGGGAGTTTACGCAAACGATTATCAATGATTTGTTGAAGGAGGAAGAATGA
PROTEIN sequence
Length: 113
MEPKLSSDLLRGHTETIVLGILLKRDMYGFEIYNTILERTGEKYELKETTLYSSYKRLEKEGCITSYWGDETQGARRKYYRITEKGCELYQQNKLDWEFTQTIINDLLKEEE*