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S28_scaffold_1420_curated_1

Organism: S28_Methanosarcina_42_8_curated

near complete RP 33 / 55 MC: 6 BSCG 23 / 51 MC: 3 ASCG 36 / 38 MC: 1
Location: 2..295

Top 3 Functional Annotations

Value Algorithm Source
Probable porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=1434118 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina siciliae C2J.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.6
  • Coverage: 97.0
  • Bit_score: 171
  • Evalue 5.70e-40
hemC; porphobilinogen deaminase (EC:2.5.1.61) similarity KEGG
DB: KEGG
  • Identity: 85.6
  • Coverage: 97.0
  • Bit_score: 170
  • Evalue 1.50e-40
Probable porphobilinogen deaminase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=HEM3_METAC similarity UNIREF
DB: UNIREF100
  • Identity: 85.6
  • Coverage: 97.0
  • Bit_score: 170
  • Evalue 5.30e-40

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Taxonomy

Methanosarcina siciliae → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 294
GAAATTGAACGCATCCTTATTTCCGAACTCGGAGGGGGCTGTACAACTCCTATTGGTTCCTATGCAGAGCTTACACCTGATAGGAAAGAAATCCATGTTCGGGCTGAAGTCCTTTCCCTTGACGGCAGGGAAGATGTTCGGATTGATGAGTTTATCCCGATGAGGGGTGGTGTTGAAAAAGCCAGGGAACTCGGGCACAGGCTTGTGAAGATGGGCGGCAAGAGGCTGGCTGAAGAAGCGCTCCTTCAGATCTCCAGAGATGCATGCGATTCCGGGGATTCTTACGATTATTGA
PROTEIN sequence
Length: 98
EIERILISELGGGCTTPIGSYAELTPDRKEIHVRAEVLSLDGREDVRIDEFIPMRGGVEKARELGHRLVKMGGKRLAEEALLQISRDACDSGDSYDY*