ggKbase home page

S28_scaffold_3228_curated_1

Organism: S28_Methanosarcina_42_8_curated

near complete RP 33 / 55 MC: 6 BSCG 23 / 51 MC: 3 ASCG 36 / 38 MC: 1
Location: comp(2..643)

Top 3 Functional Annotations

Value Algorithm Source
Baseplate J-like protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KWK1_METHD similarity UNIREF
DB: UNIREF100
  • Identity: 54.1
  • Coverage: 218.0
  • Bit_score: 251
  • Evalue 5.20e-64
Uncharacterized protein {ECO:0000313|EMBL:AKB78406.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.1
  • Coverage: 213.0
  • Bit_score: 375
  • Evalue 3.30e-101
Baseplate J-like protein similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 218.0
  • Bit_score: 251
  • Evalue 1.50e-64

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methanosarcina horonobensis → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 642
GTGCCAGAAAAAGCAAAACCTGCACGCGTAAATCTCAGTTTCAGTTCGACCCAAAAAACGGAACTAATAAAGGGAACTCAGGTGTCAACTGAAGCTGCAGGCAAGAAAATCTATTTCTCTCTGGATGAGGACCTGGATATAGTTCCCGCTGCCTTTGGACTGGAGAAACTGATAGTTGACGGGCTTACAGAAGGAGTATTTGACCGTACCAGCGCAAATGAAGCAGGAGACCTTTTCTTTGCTCCTTTTGGCGAGCAGGTTCGGGCTGGATGTGCATTTTATATGGGTTTTGGAAAAAACAGTGCCATTCCGCCTCAGACCCTTAATTTCATGTGTTATCTTTACGAGGAAGACCTGAAAGCTCCTGGAAGCCATGGAGATGAGCAGGAATATGGGTTCGAAAATGCGAAATTAAGCTGGGAGATTTCGGACCCGGCTGGCGGATATCCCTGGAGGGAGGTAAACCCTGTAGACGGTACAGAAGGGTTCAGAAAGAGCGGAAGAATCGTGTTCAAGGAGCTTTCAGGCTGGAAAGCGGTTCAATCTATTCCTTTAATGAATTTCGAGAATTCCTATTTCTGGCTCCGCTGTACGGTAAAAGAGTCCGGTTACGAGTACCCTCCGAGAATTGAAAAAATAAGG
PROTEIN sequence
Length: 214
VPEKAKPARVNLSFSSTQKTELIKGTQVSTEAAGKKIYFSLDEDLDIVPAAFGLEKLIVDGLTEGVFDRTSANEAGDLFFAPFGEQVRAGCAFYMGFGKNSAIPPQTLNFMCYLYEEDLKAPGSHGDEQEYGFENAKLSWEISDPAGGYPWREVNPVDGTEGFRKSGRIVFKELSGWKAVQSIPLMNFENSYFWLRCTVKESGYEYPPRIEKIR