ggKbase home page

S28_scaffold_581_curated_4

Organism: S28_Methanosarcina_42_8_curated

near complete RP 33 / 55 MC: 6 BSCG 23 / 51 MC: 3 ASCG 36 / 38 MC: 1
Location: comp(2185..3255)

Top 3 Functional Annotations

Value Algorithm Source
Iron ABC transporter, permease protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TRP4_METAC similarity UNIREF
DB: UNIREF100
  • Identity: 92.8
  • Coverage: 349.0
  • Bit_score: 649
  • Evalue 1.10e-183
  • rbh
Vitamin B12 ABC transporter, permease component BtuC {ECO:0000313|EMBL:AKB79650.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 356.0
  • Bit_score: 676
  • Evalue 1.50e-191
iron ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 92.8
  • Coverage: 349.0
  • Bit_score: 649
  • Evalue 3.10e-184
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methanosarcina horonobensis → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1071
ATGGAAGAAGTATCGACTGACGTGAAAAAATCGGCCCTCACAGCCCTCGATTTTTTTGAGGCGAGGAAGCTGTGTATCATGCTCTTTCTCGCTGTTGTTATGGTGGCAGGCGGGATGGTCACGATCTGTTTGGGGACCTATCAGATTTCTATATCGGAAGTATACTCTATCATCGCCACTCATCTGTTTTCACCGGACAACGCGGATTCCCTGAATAAACTGAAAAACACGATCATCTGGAACATCCGCTTCCCGAGGGTCATTATGGCTATAACCGTCGGCATCGGTCTTTCTGTGGCCGGGGCGGTTTATCAGGGATGTTTCCGCAACCCTCTTGTGGAGCCATACATCCTTGGAGTGTCTTCGGGAGCGGCGTTCGGCGCGGCGCTTGGGATTGTCTACCCTCATATCTTTATTTCTATACAGCTAGGTGCTTTCGTTTTTGCTTCGCTCTCCGTATTCCTGGCGTACACGCTGGCAAGGAGCAGGGGACAGACGCCAGTGGTCACGCTGGTACTTGCCGGTATCATCATAGGCTCGATATTTTCCGCTTGTGTTTCCATCATGAAATACCTCTCAAATGATACACAACTGAGAGAGATTGTCTTCTGGATGATGGGCGGCTTCTACTACACCACGTGGAATGACGTATATCTGACTGTGCCTGTTGTGTTAATATCCGTAGCTATCATGTGGTTCTTTGGGTGGAAGCTGAACGTCCTTTCCATGGGCGACGAGGAATCCCGGGCGCTGGGTGTGAACCCGGAAGTTTTTAAGTTTATTTTCATCGTGCTGGCAACGCTGGTGACTGCCATCTGCGTATCTTCGGTCGGGATTATCGCATGGGTAGGTCTGATGATGCCCCACGCAGCCCGCCTTATCCAGGGGCCGGATAACCGTTTTGTCATTCCCACAGCAGCGCTGATGGGCGGTGTTTACATTATCTTTTGTGATACGATTGCGCGTACTCTGACCTCGGCAGAAATTCCTATCGGGATCATCACAGCCATCGTAGGTGCGCCTTACCTCGTGTATCTGCTGCGTAGCAAAGAAAAGGAGATCTTCGGGTGA
PROTEIN sequence
Length: 357
MEEVSTDVKKSALTALDFFEARKLCIMLFLAVVMVAGGMVTICLGTYQISISEVYSIIATHLFSPDNADSLNKLKNTIIWNIRFPRVIMAITVGIGLSVAGAVYQGCFRNPLVEPYILGVSSGAAFGAALGIVYPHIFISIQLGAFVFASLSVFLAYTLARSRGQTPVVTLVLAGIIIGSIFSACVSIMKYLSNDTQLREIVFWMMGGFYYTTWNDVYLTVPVVLISVAIMWFFGWKLNVLSMGDEESRALGVNPEVFKFIFIVLATLVTAICVSSVGIIAWVGLMMPHAARLIQGPDNRFVIPTAALMGGVYIIFCDTIARTLTSAEIPIGIITAIVGAPYLVYLLRSKEKEIFG*