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S28_scaffold_1854_curated_2

Organism: S28_Methanosarcina_42_8_curated

near complete RP 33 / 55 MC: 6 BSCG 23 / 51 MC: 3 ASCG 36 / 38 MC: 1
Location: 540..725

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit E' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 98.4
  • Coverage: 61.0
  • Bit_score: 127
  • Evalue 9.10e-28
Transcription elongation factor Spt4 n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PZ97_METMA similarity UNIREF
DB: UNIREF100
  • Identity: 98.4
  • Coverage: 61.0
  • Bit_score: 127
  • Evalue 3.20e-27
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 61.0
  • Bit_score: 127
  • Evalue 4.50e-27

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Taxonomy

Methanosarcina horonobensis → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 186
ATGCCAGAAAAAGTATGTCGACACTGTTTGAGAGTCCTGGAAGGGCAAACCTGTCCTGTTTGCGGAACTTCTGACCTCGCAGAGGAATGGAGTGGACTTGTTATTATCCTTGACACGGAACGCTCGGAAATCGCAAAAAGACTCGGGGTTGACATCCCGGATAGATTTGCCTTGAAGGTGCGCTGA
PROTEIN sequence
Length: 62
MPEKVCRHCLRVLEGQTCPVCGTSDLAEEWSGLVIILDTERSEIAKRLGVDIPDRFALKVR*