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S28_scaffold_7375_curated_1

Organism: S28_Methanosarcina_42_8_curated

near complete RP 33 / 55 MC: 6 BSCG 23 / 51 MC: 3 ASCG 36 / 38 MC: 1
Location: comp(3..1184)

Top 3 Functional Annotations

Value Algorithm Source
Geranylgeranyl diphosphate reductase {ECO:0000313|EMBL:AKB78180.1}; EC=1.3.1.83 {ECO:0000313|EMBL:AKB78180.1};; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.3
  • Coverage: 394.0
  • Bit_score: 682
  • Evalue 2.30e-193
Geranylgeranyl diphosphate reductase (EC:1.3.1.83) similarity KEGG
DB: KEGG
  • Identity: 87.4
  • Coverage: 398.0
  • Bit_score: 677
  • Evalue 1.20e-192
Uncharacterized protein n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1Q8G0_METMZ similarity UNIREF
DB: UNIREF100
  • Identity: 85.6
  • Coverage: 396.0
  • Bit_score: 672
  • Evalue 1.70e-190
  • rbh

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Taxonomy

Methanosarcina horonobensis → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1182
ATGAGATATGATGTTGTTGTGGTAGGAGCTGGCCCTGTAGGTTCCACTGCTGCCCGATATGCGGCAATGAACGGAGCAAAAGTCCTTCTGCTCGAAGAGCATGCCTCAATAGGCTCTCCTGTGGGCTGTACAGGGCTTCTGAGCACAAGGGCTGTTGAAGAGTGTGATCTCAAGCCTTCGGACGAATTCGTGTTCAATTCTGTTCGCGGCGCTTTTGTGCATGCTCCAGATGGGCAGTGCCTGCCAATTGACGGGAAGGGGACAAAAGCGTATGTTGTTTCCAGGAAAAACTTTGACCGGACCCTTGCAGTAATGGCTGTAGAAAAAGGCGTTGAACTCTCCCTGAAAACGAGGGCTATAGGGCTTGAGAAGGAAAACTTCAAAGCCGAAAACGGGACAGAAAGAAGTGATAAAGAAAAGAACTCCCCCGTGAAACTCAAAGTACTCAAAAACGGCAAGCTTGAAACTATATCCGCATCTGTAGTTATAGGTGCGGACGGGGTAAAAAGCCGCATAGCCAGTTACGCAGACCTTGGAAAACCTGCGCGTGTGCTCCCGGGAATTCAGATTGAAGCTCCCTATGCCTCAGAAGACAGTGACTTTGTCGAATTGTTTCCCGGTTCTTCAGCTCCGGGTTTCTTTGCCTGGACAGTGCCCCTTGACGAAAAAATCTCAAGGATAGCACTTGCTATAGAGCCGGGAATCGCGTGCAAAAGTAGACACTGCGAGAATTCACCGCTTTTCTATCTTGAAAAATTCCTGCGCTCAAATCCCCACGTAAAAGCCAGGTACTCAGGAGGTATGCTTGATTTTGTAGTTGGGGGAATTCCTATCGGCCCTCAGGAAAGAACATATTCCGACGGCATCCTGCTCGCAGGCGATGCTGCAGGACAGGCTAAGCCCACATCAGGAGGCGGAGTCTATACAGGAGCTTTTGCAGCAAAAATTGCCGGAAAAATTGCAGCTGAAGCCTCCTTAGAAGGAGATACCTCTGCAAGCnnnnnnnnnnnnnnnnnnAGGCTCTGGCGAAAAGGCCTGTCAAAAGAACTTGAAATAGGCATGAAAATCCATGATTACATGGGAAAGCTGGAAGACCGTCAGTTAAACGAACTCATAGGCTCGTTAAATAGCCCTTCCATCCTGAACACAATTACCGAGTACGGAGATATGGACCACCCATCT
PROTEIN sequence
Length: 394
MRYDVVVVGAGPVGSTAARYAAMNGAKVLLLEEHASIGSPVGCTGLLSTRAVEECDLKPSDEFVFNSVRGAFVHAPDGQCLPIDGKGTKAYVVSRKNFDRTLAVMAVEKGVELSLKTRAIGLEKENFKAENGTERSDKEKNSPVKLKVLKNGKLETISASVVIGADGVKSRIASYADLGKPARVLPGIQIEAPYASEDSDFVELFPGSSAPGFFAWTVPLDEKISRIALAIEPGIACKSRHCENSPLFYLEKFLRSNPHVKARYSGGMLDFVVGGIPIGPQERTYSDGILLAGDAAGQAKPTSGGGVYTGAFAAKIAGKIAAEASLEGDTSASXXXXXXRLWRKGLSKELEIGMKIHDYMGKLEDRQLNELIGSLNSPSILNTITEYGDMDHPS