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S28_scaffold_1531_curated_1

Organism: S28_Methanosarcina_42_8_curated

near complete RP 33 / 55 MC: 6 BSCG 23 / 51 MC: 3 ASCG 36 / 38 MC: 1
Location: 1..663

Top 3 Functional Annotations

Value Algorithm Source
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1434120 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina siciliae T4/M.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.6
  • Coverage: 220.0
  • Bit_score: 388
  • Evalue 5.10e-105
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=RSGA_METAC similarity UNIREF
DB: UNIREF100
  • Identity: 85.0
  • Coverage: 220.0
  • Bit_score: 380
  • Evalue 5.80e-103
  • rbh
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 85.0
  • Coverage: 220.0
  • Bit_score: 380
  • Evalue 1.60e-103
  • rbh

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Taxonomy

Methanosarcina siciliae → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 663
TATTCTTCCGGGGCAAATCCTGTGATTTTACTGAACAAGATCGACCTTGCGGATGACCCGACCCGACTGGTAGAAAAAATCCAGTTTATTGCAGGGGATGCACCTGTCATTCCTCTAAGCGCCCTTTCAAAAACCGGGTTTGATTCACTCACCTCTTACCTTAACCCCGGCGAAACAGTTGCACTCATAGGCTCCTCAGGCGTCGGAAAATCCACGCTTATCAACTCTCTTCTTGGTGAAACCGTCCAGAGAACTGCGGATATCAGAGAAGACGATGAAAAAGGAAGGCATACAACCACAGTCCGCCAGATGTTTCTTCTCCCAAATGGAACGGTTCTTATAGACAACCCCGGTATCAGGGAAATCCAGCTCGGAGACTCTGCCGAAGGCCTTGAAAAAGCTTTTTCCGAGATTGTTGATGCAGCCTGTAACTGCCGGTTTAAAGATTGCACTCACCATGATGAGCCGGGCTGTGCTGTCCTGCAGGCAGTAAAGGACGGGCTTATTCCTGAGGAGCGGCTCGAAAGCTATCACAGGTTAACTGGCGAACTTGCTTTCCAGTCAAAAAAATCCGAAATCGGGCTGAAACGGCTCGAAAAAGAAAAACACAAGAAAATTGCAGTGACTATCAAAAAATATAAGAAATTTACGGGCAAGCCGTAA
PROTEIN sequence
Length: 221
YSSGANPVILLNKIDLADDPTRLVEKIQFIAGDAPVIPLSALSKTGFDSLTSYLNPGETVALIGSSGVGKSTLINSLLGETVQRTADIREDDEKGRHTTTVRQMFLLPNGTVLIDNPGIREIQLGDSAEGLEKAFSEIVDAACNCRFKDCTHHDEPGCAVLQAVKDGLIPEERLESYHRLTGELAFQSKKSEIGLKRLEKEKHKKIAVTIKKYKKFTGKP*