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S28_scaffold_965_curated_6

Organism: S28_Methanosarcina_42_8_curated

near complete RP 33 / 55 MC: 6 BSCG 23 / 51 MC: 3 ASCG 36 / 38 MC: 1
Location: comp(2817..3989)

Top 3 Functional Annotations

Value Algorithm Source
Ornithine decarboxylase {ECO:0000313|EMBL:AKB78060.1}; EC=4.1.1.17 {ECO:0000313|EMBL:AKB78060.1};; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 390.0
  • Bit_score: 758
  • Evalue 2.60e-216
ornithine decarboxylase (EC:4.1.1.17) similarity KEGG
DB: KEGG
  • Identity: 94.4
  • Coverage: 390.0
  • Bit_score: 745
  • Evalue 7.70e-213
  • rbh
Ornithine decarboxylase n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PS97_METMA similarity UNIREF
DB: UNIREF100
  • Identity: 94.4
  • Coverage: 390.0
  • Bit_score: 745
  • Evalue 2.70e-212
  • rbh

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Taxonomy

Methanosarcina horonobensis → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1173
ATGAGAAAAGAGCCTTATGAGTTCCCGCTGGAAGATTACATTTCAAGAGAAGAGTTTAATAAAATTAAAAAATTCTCGCGGGATAAAGAAACACCGTTTTTGATCGTTGATCTTCAAAAGATAGAGCGAAGnnnnnnnnnnnnnnnnnnnnACATGCCTTTTGCAAAAATTCATTATGCTGTTAAGGCTAATCCTATGGATAAAGTAGTGCTTGCCCTGAAGAAAAAAGGTTCCAGTTTTGATGTGGCAACGGTCTACGAACTTGATCAACTGCTAAGGCTCGGGGTAGAGCCTGAGAGGATAAGTTACGGCAATACGATCAAAAAAGAAATGGACATAGCTTATGCCTATGAGAACGGGGTAAGGCTCTTTGTTACGGATTCTGAGAGTGATTTAAAGAAGCTGTCAAGAAGAGCTCCGGGTTCCAGGGTTTTTTTCAGGATCCTTACAGAAAGTGACGGCGCTGACTGGCCACTTTCTAGAAAATTCGGCTCCCACCCTGACCTGATATACAAATTGATTCTAAAAGCCGAAAAGCTTGGGCTTGAGCCTTATGGACTTTCTTTTCACGTAGGTTCCCAGCAAAGGGATATCGGGCAATGGGACAATGCAATTTCCAAGTGCAAATATCTTTTTGAAGCAGTAGCTGAAAAAGGAATCCGGCTGAAAATGATCAACCTTGGTGGGGGTTTTCCTGCAAAATACCAGGCTCAGGCCCATGACCTTGAGACATATGCCCGGGAAATCCGCCGCTTTCTACATGATGACTTCGGAGAAGAACTTCCTGAGATCCTTATCGAGCCAGGTCGGTCTCTGGTCGCCGATGCCGGCATAATCGTAAGCGAAGTTGTTATGATCTCTAAAAAAGCCAGGTTTAACCAGTACAAATGGGTCTATCTAGATATCGGAAAGTTCGGCGGGCTTATAGAAACCCTTGACGAGTGCATAAAATATCCGATTTTCTGTGATAAAAAAGGCTGTGCAGAAGAGGTCATCCTTGCAGGTCCCACGTGCGACAGCATGGACATCCTTTATGAGCACCATAAGTATTCCTTTCCCCATACCATGAGAGAAGGCAATCGTGTATATATCTTCACAACCGGAGCTTACACCCAGAGTTATAGTTCCGTGAATTTTAACGGTTTTCCTCCTCTCAAATCCTACATTATCTGA
PROTEIN sequence
Length: 391
MRKEPYEFPLEDYISREEFNKIKKFSRDKETPFLIVDLQKIERXXXXXXXXMPFAKIHYAVKANPMDKVVLALKKKGSSFDVATVYELDQLLRLGVEPERISYGNTIKKEMDIAYAYENGVRLFVTDSESDLKKLSRRAPGSRVFFRILTESDGADWPLSRKFGSHPDLIYKLILKAEKLGLEPYGLSFHVGSQQRDIGQWDNAISKCKYLFEAVAEKGIRLKMINLGGGFPAKYQAQAHDLETYAREIRRFLHDDFGEELPEILIEPGRSLVADAGIIVSEVVMISKKARFNQYKWVYLDIGKFGGLIETLDECIKYPIFCDKKGCAEEVILAGPTCDSMDILYEHHKYSFPHTMREGNRVYIFTTGAYTQSYSSVNFNGFPPLKSYII*