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S28_scaffold_11287_curated_1

Organism: S28_Methanosarcina_42_8_curated

near complete RP 33 / 55 MC: 6 BSCG 23 / 51 MC: 3 ASCG 36 / 38 MC: 1
Location: comp(533..1330)

Top 3 Functional Annotations

Value Algorithm Source
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 265.0
  • Bit_score: 525
  • Evalue 2.50e-146
Phosphomethylpyrimidine synthase 1 n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=THIC1_METAC similarity UNIREF
DB: UNIREF100
  • Identity: 96.2
  • Coverage: 265.0
  • Bit_score: 520
  • Evalue 5.70e-145
  • rbh
thiC; thiamine biosynthesis protein ThiC similarity KEGG
DB: KEGG
  • Identity: 96.2
  • Coverage: 265.0
  • Bit_score: 520
  • Evalue 1.60e-145
  • rbh

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Taxonomy

Methanosarcina horonobensis → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 798
TTAAATTCCCTCGAGCGCCTGCGCCAGAGTGACCGGATTATGAATGTGGTCAGCCGGGGTGGCTCTTTTACCATTGCCTGGATGCTGCATAACGGGGAAGATAATCCCTTCTATGTCGAATTTGATTATCTCCTTGAAATCGCAAAAGAATACGATATGACCCTCAGCCTTGGGGACGGCATGCGTCCCGGCTGTATTGCCGATGCTTCCGACCGCCCCAAGTTCATGGAGTTTATCACCCTCGGGGAGCTTGTAAAACGTGCAAGGGCTGTCGATGTCCAGACTTTCGTTGAAGGGCCGGGGCATGTCCCCTTAAACGAAATCGAACTCAGTGTCCGGGGCATGAAAGAACTCTGCGACGGAGCTCCTCTCTACCTTCTGGGGCCCCTTGTTACCGATATTGCCCCCGGTTTTGACCATATCACCGGTGCAATCGGAGGAGCAGTTGCGGGAATGTACGGCACCGACTTCCTCTGTATGGTAACCCCCTCGGAACACCTTGCCCTCCCGGCTCTCGAAGATATTAAAGAGGGACTGCTCGTAACAAAGCTTGCAGCCCACACTATCGACCTCATAAAAGAAGGTCCGAGAGAACGTGCCTGGAAACAGGATACAGCCATGGCCTATGCCCGCAGGGACCTAGACTGGGAAAAGCAGTTCGAGCTTGCAATCGACGGCGCCCGCGCCCGCAAAATCCGGGACGCCAGGAAGACGGAAAGCGATGCCTGTTCTATGTGCGGGGAACTCTGCGCGGTTAAGATCGTAAAGGAAGCTTTCGGGGAAAAGAAAAAAGAATAA
PROTEIN sequence
Length: 266
LNSLERLRQSDRIMNVVSRGGSFTIAWMLHNGEDNPFYVEFDYLLEIAKEYDMTLSLGDGMRPGCIADASDRPKFMEFITLGELVKRARAVDVQTFVEGPGHVPLNEIELSVRGMKELCDGAPLYLLGPLVTDIAPGFDHITGAIGGAVAGMYGTDFLCMVTPSEHLALPALEDIKEGLLVTKLAAHTIDLIKEGPRERAWKQDTAMAYARRDLDWEKQFELAIDGARARKIRDARKTESDACSMCGELCAVKIVKEAFGEKKKE*