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S28_scaffold_3035_curated_3

Organism: S28_Methanosarcina_42_8_curated

near complete RP 33 / 55 MC: 6 BSCG 23 / 51 MC: 3 ASCG 36 / 38 MC: 1
Location: 1342..1662

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D1A997 related cluster n=1 Tax=unknown RepID=UPI0003D1A997 similarity UNIREF
DB: UNIREF100
  • Identity: 70.8
  • Coverage: 106.0
  • Bit_score: 164
  • Evalue 5.40e-38
Pectin degradation protein KdgF {ECO:0000313|EMBL:AKB78771.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 106.0
  • Bit_score: 189
  • Evalue 1.70e-45
cupin similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 106.0
  • Bit_score: 131
  • Evalue 1.40e-28

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Taxonomy

Methanosarcina horonobensis → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 321
ATGTTTTGTAAGAGTAATTCAAAAGAATATAAAGATCTTCTTCCCGGAATCCGGATGAAAACAGTAGTTTATGGGGAAAAGACCCTGATGACCGAGTTTCTTTTAAAAAGTGGAAGTAACCTTCCTTCTCACGACCACATTCACGAACAAACCGGCTATCTGGTATCAGGAAAAATTCTCCTGACTTTTGATGGAGAAACATTTGAAGTGAGCCCGGGTGATTCATGGAATATTCCCGGCGGTGTAATTCACAGTGCCGAAGCTCTGGAAGATTCCGTAGCTATTGAGGTTTTTTCTCCGAAAAGGGACGAATATTTATAA
PROTEIN sequence
Length: 107
MFCKSNSKEYKDLLPGIRMKTVVYGEKTLMTEFLLKSGSNLPSHDHIHEQTGYLVSGKILLTFDGETFEVSPGDSWNIPGGVIHSAEALEDSVAIEVFSPKRDEYL*