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S28_scaffold_3918_curated_1

Organism: S28_Methanosarcina_42_8_curated

near complete RP 33 / 55 MC: 6 BSCG 23 / 51 MC: 3 ASCG 36 / 38 MC: 1
Location: comp(2..1078)

Top 3 Functional Annotations

Value Algorithm Source
Deoxyribodipyrimidine photolyase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TIS6_METAC similarity UNIREF
DB: UNIREF100
  • Identity: 83.3
  • Coverage: 359.0
  • Bit_score: 609
  • Evalue 1.30e-171
  • rbh
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:KKG11657.1}; TaxID=1483600 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.A.1B.4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.8
  • Coverage: 359.0
  • Bit_score: 633
  • Evalue 1.50e-178
phr; deoxyribodipyrimidine photolyase similarity KEGG
DB: KEGG
  • Identity: 83.3
  • Coverage: 359.0
  • Bit_score: 609
  • Evalue 3.60e-172
  • rbh

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Taxonomy

Methanosarcina sp. 2.H.A.1B.4 → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1077
ATGAACCCAAAACGAGTCCGGACTCTCAAATCGGGGAAATCAGGTGAAGGGCCTGTTGTTTACTGGATGAGCCGTGACCAGAGAGTTGAGGACAACTGGGCTCTACTCTTTGCGAGGGCAATAGCACAGGAGACTGATGTACCGGTAGTCGTGATTTTCTGCTTGACAAAAGAGTTTTTGGGTGCCGGAAGAAGGCATTAnnnnnnnnnnnnnAAAGGGCTGCAGGAATTTGAGGGTGCCCTTTCCCGGAAAAGGATTCCTTTCGTTTTTCTGCGAGGAGACCCCGGGCAAAAAATACCTGAATTTGTAAGAGAGTACGGTATTGGGACTCTTGTCACTGATTTCAGTCCACTTCGTGTAAAAGCTGAATGGGTAGAAAAAATTATTACTGATATCGAAATCCCATTTTTTGAGGTTGATGCCCATAATGTCGTCCCATGCTGGGAAGCTTCTCCAAAGCAGGAGTACGCTGCACATACTTTTCGCCCGAAACTCTATGGGCGCCTCTCCGAGTTTTTTGAAGAATTTCCTGGGCTTAAGCCAAATTCCGAATCAGCTGAAATCCTATCGGGCAACGGCATGCTGGAAGTTTTATCAAGCACAAGGGAAACCGGAATTAAAGCCCTTCTTCCTCAGGGAATCTCTGGCAAAAGTAATGATTCCCTCTTTGAGCCTGAATATTTCGAGCCCGGGGAAAAAGCTGCAAGAAAGGTAATGGAGAGTTTTCTCACAGAGAAACTTGACTCTTACCGTACGCTGCGGAATGATCCAGCAAAGGATGGGCTCTCGAACCTTTCCCCTTATCTTCATTTCGGGCAGATCTCTGCACAGAGGGTCGTGCTTGAGGTGGAAAAGACAAAAAGCGATCCTGAATCAAAGAAAGCTTTCCTGGACGAGATCCTTGTATGGAAGGAGATTGCAGACAACTTCTGTTATTACAATCCCGGATATGATAGATTTGAGAGCTTTCCTGACTGGGCAAAGAAGTCCCTGAATGCTCACCGGGATGACCGGAGAAAGTATATTTACACCCTCGAAGAATTCGAAGCCGGAAAAACACATGATCCCCTCTGGAAT
PROTEIN sequence
Length: 359
MNPKRVRTLKSGKSGEGPVVYWMSRDQRVEDNWALLFARAIAQETDVPVVVIFCLTKEFLGAGRRHXXXXXKGLQEFEGALSRKRIPFVFLRGDPGQKIPEFVREYGIGTLVTDFSPLRVKAEWVEKIITDIEIPFFEVDAHNVVPCWEASPKQEYAAHTFRPKLYGRLSEFFEEFPGLKPNSESAEILSGNGMLEVLSSTRETGIKALLPQGISGKSNDSLFEPEYFEPGEKAARKVMESFLTEKLDSYRTLRNDPAKDGLSNLSPYLHFGQISAQRVVLEVEKTKSDPESKKAFLDEILVWKEIADNFCYYNPGYDRFESFPDWAKKSLNAHRDDRRKYIYTLEEFEAGKTHDPLWN