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S28_scaffold_3298_curated_1

Organism: S28_Methanosarcina_42_8_curated

near complete RP 33 / 55 MC: 6 BSCG 23 / 51 MC: 3 ASCG 36 / 38 MC: 1
Location: 2..1039

Top 3 Functional Annotations

Value Algorithm Source
Peptide chain release factor subunit 1 n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FF0_METBF similarity UNIREF
DB: UNIREF100
  • Identity: 87.0
  • Coverage: 345.0
  • Bit_score: 604
  • Evalue 3.90e-170
  • rbh
Peptide chain release factor subunit 1 {ECO:0000256|HAMAP-Rule:MF_00424}; Translation termination factor aRF1 {ECO:0000256|HAMAP-Rule:MF_00424}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.4
  • Coverage: 345.0
  • Bit_score: 614
  • Evalue 9.00e-173
Eukaryotic peptide chain release factor subunit 1 similarity KEGG
DB: KEGG
  • Identity: 88.1
  • Coverage: 345.0
  • Bit_score: 605
  • Evalue 6.40e-171

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Taxonomy

Methanosarcina horonobensis → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1038
GATTCTTTGCTGGCAAAGTTAAGATATCTTAAAAAAATACCGAGAAATGGGCTAGTTTATTTTACAGGAGTTATCGATACTGGAGCTAACAGGACAAGCATGGTAAACGAAGTCCTTATTCCTACGGAACCTGTTGCAGATTATATATATAACCGTGACTCCGTTTTTTATCTTGAACCTCTTGAGGAAATTCTAAGGGAATGCAGTACTTATGGGCTTATACTTCTTGATTTAAGAGAAGCTACTATCGGAATGCTTGTAGGTAGGCAAATTGAAGTTATTAGGCATCTCCATTCTACTGTCCCCGGCAAACAAAGAAAAGGAGGTCAGAGTGCACATCGTTTTGAACAACTCAGACGCATTGCTATTCATGATTTCTATAAAAGAATCGGGGATGCTGCAAGTGAGGCATTCCTTGAAGTAGAGCCAGATGAACTTAAAGGCATTCTTATAGGAGGGCATTCTCCAACTAAAGAAGAGTTTAATGAAGGCGAATTTCTACATTATGAGCTTCAGAAAAAGGTTCTTGGATTGTTTGATACAGGGTATACAGATGAATCGGGTTTTTCTGAGTTAATAAATGCGGCAGAGGATACTCTCCAGGATATTGACTTAATTAAGCAAAAGAAAGATATGGAAATATTTTTTAAAGAAATCGCTACTGAGTCTGGTAAAGTATCCTATGGAGAAGATAATGTTCGGGCGAATCTTGAAATAAAGGCAGTTGATGTGCTTTTACTTTCTGAAGACCTGCGATCTGAAAGAGTAACTATCAAATGCAGTGTTTGTGAATATAAGAATAAATGGACAAGAAAATGGAAGTCAAATGAAACTGTTCCTGCGGCAGGGAATTGTCCTGAATGTGGTTCTGCACTTGAAGTCACGGATGTTACTGATATCGTTGACGAATTTTCAGAACTCGCTGATAAAGGAAATGCAAGGATTGCTTTTATATCAACAGATTTCGACGAAGGTTCTCAACTTCTGATAGCTTTTGGCGGAATTGCTGCAATCCTCAGATATAGCACAGGGGTGTAA
PROTEIN sequence
Length: 346
DSLLAKLRYLKKIPRNGLVYFTGVIDTGANRTSMVNEVLIPTEPVADYIYNRDSVFYLEPLEEILRECSTYGLILLDLREATIGMLVGRQIEVIRHLHSTVPGKQRKGGQSAHRFEQLRRIAIHDFYKRIGDAASEAFLEVEPDELKGILIGGHSPTKEEFNEGEFLHYELQKKVLGLFDTGYTDESGFSELINAAEDTLQDIDLIKQKKDMEIFFKEIATESGKVSYGEDNVRANLEIKAVDVLLLSEDLRSERVTIKCSVCEYKNKWTRKWKSNETVPAAGNCPECGSALEVTDVTDIVDEFSELADKGNARIAFISTDFDEGSQLLIAFGGIAAILRYSTGV*