ggKbase home page

S28_scaffold_3393_curated_1

Organism: S28_Methanosarcina_42_8_curated

near complete RP 33 / 55 MC: 6 BSCG 23 / 51 MC: 3 ASCG 36 / 38 MC: 1
Location: 2..955

Top 3 Functional Annotations

Value Algorithm Source
F420-nonreducing hydrogenase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TRN3_METAC similarity UNIREF
DB: UNIREF100
  • Identity: 90.9
  • Coverage: 317.0
  • Bit_score: 607
  • Evalue 5.50e-171
F420-nonreducing hydrogenase {ECO:0000313|EMBL:KKH47028.1}; TaxID=1483601 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 1.H.A.2.2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.9
  • Coverage: 317.0
  • Bit_score: 630
  • Evalue 6.50e-178
vhtA; F420-nonreducing hydrogenase similarity KEGG
DB: KEGG
  • Identity: 90.9
  • Coverage: 317.0
  • Bit_score: 607
  • Evalue 1.60e-171

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methanosarcina sp. 1.H.A.2.2 → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 954
TTCGGTTCCGAACTTGTTGGAGAGACCCTTCTTGACCTTCCTGCAAGCCTCAGACACGACAAAATCGGAGGATACAGTGACCCTTCCAAGATCGCCTTCCTTTCATATGGTGGGTTCTACAACCCTGATAATGGGGACGGATATGACCCGAACAGCCCTGCAGGAGACCGCTTCCTGACTTCAGGCGTGGTAACCGGAAGTCTCGAATATCAGAATTTTGATGCAAGCAAGATTACCGAAAGTGTTGCTCACGCCTTCTATGAAGACACAACTGATGTCCATCCTTCAAAAGGTGAGACCAATCCGTTTACCGATCCTGAAGCAATCCGCTTCGATCAGGGTTCCGAGAGCAGGTACACCTGGAATAAGGCTCCGAGATATGACGGAGTTCCCTGTGAAGTCGGACCTCTTGCACGTATGCTTGCAGCTAAAGAACCTCTTGTGACCGGGCTTGCTCTGGCCTTTAACGAGAATGGTTACTCTGCAGCTAACGTTTATACAAGAATGATGGCCCGCATCCAGGAAACAGCCATTATCGCAAATGAGCTCCTTAAGTGGGTCACTGTCGATTATGACCCGAACGGCAAGATCGCTGTTGACACCAACCTTTCGATGGCAAAGAATTCCGAAGGTATGGGCCTCTGGGAAGCTCCACGCGGCGCTCTCGGGCACTGGGTCTCTACCGACAGCAACTCTAAGGTTATTACCTATCAGCCCGTGGTCCCGAGCACCTGGAACCTCTCCCCGAGAGACGGTGCAGGTGTGCCCGGTCCTCTTGAGCAGTCCCTTATAGGGGCAAAGATCAATGCCGTAGACAATGCTCTTGGCGTCGATTACACCAATCCGGTTAACATCCTTCATATCGGCAGGTCCTATGATCCCTGCGTTTCATGCGCAGTCCACACCATTGACCTTACCGGGAAAAACGCTCCACGTACTTTAAGAATAGTATAA
PROTEIN sequence
Length: 318
FGSELVGETLLDLPASLRHDKIGGYSDPSKIAFLSYGGFYNPDNGDGYDPNSPAGDRFLTSGVVTGSLEYQNFDASKITESVAHAFYEDTTDVHPSKGETNPFTDPEAIRFDQGSESRYTWNKAPRYDGVPCEVGPLARMLAAKEPLVTGLALAFNENGYSAANVYTRMMARIQETAIIANELLKWVTVDYDPNGKIAVDTNLSMAKNSEGMGLWEAPRGALGHWVSTDSNSKVITYQPVVPSTWNLSPRDGAGVPGPLEQSLIGAKINAVDNALGVDYTNPVNILHIGRSYDPCVSCAVHTIDLTGKNAPRTLRIV*