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S28_scaffold_259_curated_8

Organism: S28_RifOxy_Spirochaetales_55_9_curated

near complete RP 44 / 55 MC: 1 BSCG 42 / 51 ASCG 10 / 38
Location: comp(5220..6197)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase C (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 41.5
  • Coverage: 337.0
  • Bit_score: 227
  • Evalue 4.50e-57
Pseudouridine synthase, RluA family id=1275917 bin=GWE1_Spirochaete_60_18 species=Treponema azotonutricium genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE1_Spirochaete_60_18 organism_group=Spirochaetes similarity UNIREF
DB: UNIREF100
  • Identity: 47.6
  • Coverage: 317.0
  • Bit_score: 278
  • Evalue 4.60e-72
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 67.0
  • Coverage: 324.0
  • Bit_score: 428
  • Evalue 5.00e-117

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Taxonomy

RIFOXYC1_FULL_Spirochaetes_54_7_curated → Spirochaetales → Spirochaetia → Spirochatetes → Bacteria

Sequences

DNA sequence
Length: 978
ATGAGTTCCTTTGATTGTTTCCAGACCGGCCCTGATGACCAAGGCCGACGATTGGACCGTATTGTCCGTAGGCTGTATCCTGAAATGCCCCTCTCGGAGCTTTATCGAATGTTCCGAACCGGCTCTATTCGTCTTTCGGGCAGGAAGGCAAAAGGTGCAGACCTGATTGAACCTGGAGACGACATCAGGATTAGATGGCCTTCAGGTCCAGATTCCTTGACTCCCGGTATAGATAATGAAATGGTTCCCAATCCAGTTGCGAGTAGTAAAAACTTTAAATATTTTGAATCCCTCATACTTATCAAGACTCCCGACTTGATCTTGCTCAACAAGCCGAAAGGTCTACTTGCCCATGGACCGACAGGTCTCGATGAACTTACTACTGAGTACTTTTCAGGCAGATTGCAGGCATCTCTTTCCTTCAGACCCGCCCCTTTACATCGACTGGACCGAAACACCAGCGGGGCCATCGCCATCTCTGCCAGCATTATTGGTGCCCGGGCCTTCAGTGAGGCCTTGCGTGCAGGTAGAATTGGCAAGGAGTATCTGGCACTGCTGGACGGTAGACTAGACCACGAAGTTGTTATGCAGGACCGCCTCCACCGCAACGAACAAAAAAAAACAAGCACCGTCACCAACGATAGAGAAGCTCCCATTGCGGAAACCAGCCTTATTCCTCTGCTGGCAAGTACAGACCATACCCTGGTGGCAATAAAAATTTCGACCGGTTTGACCCACCAGATACGGGTTCAATGTGCTGCTCAAGGTTTCCCGTTGTCAGGGGACAGTAAATATGGGGGCAAACCCTTGGCGGGTGGCTATTTGCTTCACTGTTGCCAACTTGAACTTCCTGAAGATATTGGGGCTGAATCACCCGGGACAGTAAAAGCGCCCTTGCCCCTAGCATTCAGGACAGTCTTGAAAGAGATCTTCGACCCTGTATCACTTGATTCTGAAGCCTTCCGGCGGTACCCTTAA
PROTEIN sequence
Length: 326
MSSFDCFQTGPDDQGRRLDRIVRRLYPEMPLSELYRMFRTGSIRLSGRKAKGADLIEPGDDIRIRWPSGPDSLTPGIDNEMVPNPVASSKNFKYFESLILIKTPDLILLNKPKGLLAHGPTGLDELTTEYFSGRLQASLSFRPAPLHRLDRNTSGAIAISASIIGARAFSEALRAGRIGKEYLALLDGRLDHEVVMQDRLHRNEQKKTSTVTNDREAPIAETSLIPLLASTDHTLVAIKISTGLTHQIRVQCAAQGFPLSGDSKYGGKPLAGGYLLHCCQLELPEDIGAESPGTVKAPLPLAFRTVLKEIFDPVSLDSEAFRRYP*