ggKbase home page

13_1_40cm_3_scaffold_474830_1

Organism: 13_1_40CM_3_Euryarchaeota_megabin_63_11

megabin RP 34 / 55 MC: 31 BSCG 25 / 51 MC: 18 ASCG 38 / 38 MC: 38
Location: 667..1167

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RFP7_ARCPA similarity UNIREF
DB: UNIREF100
  • Identity: 53.3
  • Coverage: 152.0
  • Bit_score: 163
  • Evalue 1.90e-37
transcription factor TFIIB cyclin-related protein; K03124 transcription initiation factor TFIIB Tax=RBG_16_Euryarchaeota_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 88.2
  • Coverage: 169.0
  • Bit_score: 283
  • Evalue 1.80e-73
transcription factor TFIIB cyclin-related protein similarity KEGG
DB: KEGG
  • Identity: 53.3
  • Coverage: 152.0
  • Bit_score: 163
  • Evalue 4.10e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Euryarchaeota_68_12_curated → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 501
TTGCGCGGCCGTTCGATTGAGGCCCTCGTCGCTGCCGCAATCTATGCCGCGTGCCGGATCACCGGCGTCCCTCGGACCCTGGACGAACTCCAGCAGACGACGGGCATCCGAAAGAAGGTCATCGGAAAGACGTACAGCGCCCTCCTGCGGGAGCTGGGGCTGCGCGTCCCGCCCTCAAAGCCCGCGGACTATGTGAGCCGCTTCTGTTCCGAGCTCGGACTCAGCCAGAACGTGCACGCCGAGGCCCTACGGATCATCAAGGAGATCGAGGCTGCGGACCCGTCCGCGTCCCTCAGCCCGATCGGGACCGCTGCGTCCGCGATCTATCTGGCGAGCCTGTCCCAGGGCGAGCGGCGCCCGCAGAAAGCGATCGCGAAGGTCGCGGGCGTCAGCGAGGTCACTCTGCGCAACCGGTTCCGGTTCATGGACGAGAAGTACATGGAGAGCCTCGTCCTCCCCCGCGGGCGGGTTCCTCGCCCTCAGTCCGGGATCGGCCGCTGA
PROTEIN sequence
Length: 167
LRGRSIEALVAAAIYAACRITGVPRTLDELQQTTGIRKKVIGKTYSALLRELGLRVPPSKPADYVSRFCSELGLSQNVHAEALRIIKEIEAADPSASLSPIGTAASAIYLASLSQGERRPQKAIAKVAGVSEVTLRNRFRFMDEKYMESLVLPRGRVPRPQSGIGR*