ggKbase home page

13_1_40cm_3_scaffold_88793_1

Organism: 13_1_40CM_3_Euryarchaeota_megabin_63_11

megabin RP 34 / 55 MC: 31 BSCG 25 / 51 MC: 18 ASCG 38 / 38 MC: 38
Location: 1..885

Top 3 Functional Annotations

Value Algorithm Source
ABC-type dipeptide/oligopeptide/nickel transport system, permease component Tax=RBG_13_Euryarchaeota_57_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 53.6
  • Coverage: 291.0
  • Bit_score: 319
  • Evalue 3.90e-84
ABC-type dipeptide/oligopeptide/nickel transport system, permease component id=24442406 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 53.2
  • Coverage: 293.0
  • Bit_score: 292
  • Evalue 6.20e-76
dipeptide/oligopeptide/nickel ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 40.8
  • Coverage: 299.0
  • Bit_score: 231
  • Evalue 2.80e-58

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_13_Euryarchaeota_57_23_curated → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 885
TCGCCGTTCCGGGCTCGGGCGACCATCATCAGCCGCCGGATGTGGGACATCGGAATCCAGGTGCTCCACAACCGAACCGCGATGACGGGCCTGATCATCCTCGTCTTCTTCACGGTCCTCGCGGTTGCAGCACCTTGGATTGCACCGCACGGTCCATTACGCGCCGTCACCGATGCGCTCCCCCTTTCGCCCCCTGATCCGCATCACCCGTTCGGGACGAACCAGTTCGACTACGACATCTATTCCCAAGTAATCTGGGGCACCCAAATCTCCCTCATCGTGGGCGTCCTCGCCGCGACCGTCGCGAGCGTAATCGGGACCGCCGTCGGGCTCGTGTCCGGCTTCATCGGAGGATGGGTGGACGAGGTGATCATGCGTTTCAACGACGTCGTCCTCTCAATCCCCTGGCTCGTCCTGATGATCGTCGTCGCGGCGCGGCTCAACTACCTCGATCTCGTCGGGATCATCCTGGTCATCGGCCTCACGGGTTGGTCCGTCACGGCGCGGGTCGTGCGGAGCCAGGTGCTGAGCCTCAAGGAACGGATGTTCGTCGAACGCGGCCGGATGATCGGCTCGTCGAACATGCACATCCTCCTTCGGCACATCTTCCCGAACGCCTTCCCCCTGATCTTCGCGAACACGATCCTGACCGTCGCCATCTCCATTCTCTCGGAGAGCGTCCTCGCGTTCCTCAACTTGTCCGTAAAGAACAACGTGAGTTGGGGACGGATCATTGCCGAAGCATATCAGCATGATGCGTTGACGATCGGCATGACGGAATGGATCATCGTGCCGGGCCTGTGCATCGTCTTCCTCGTCTTCGGCTTCTATCTGTTCGGATACGCGCTCGACGAGATTCTGAATCCGCGCCTTCGGAGGCGATGA
PROTEIN sequence
Length: 295
SPFRARATIISRRMWDIGIQVLHNRTAMTGLIILVFFTVLAVAAPWIAPHGPLRAVTDALPLSPPDPHHPFGTNQFDYDIYSQVIWGTQISLIVGVLAATVASVIGTAVGLVSGFIGGWVDEVIMRFNDVVLSIPWLVLMIVVAARLNYLDLVGIILVIGLTGWSVTARVVRSQVLSLKERMFVERGRMIGSSNMHILLRHIFPNAFPLIFANTILTVAISILSESVLAFLNLSVKNNVSWGRIIAEAYQHDALTIGMTEWIIVPGLCIVFLVFGFYLFGYALDEILNPRLRRR*