ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

S13_scaffold_1201_curated_4

Organism: S13_RifleAAC_Firmicutes_41_11_curated

near complete RP 48 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38
Location: 2106..2540

Top 3 Functional Annotations

Value Algorithm Source
PTS system fructose IIA component n=1 Tax=Solobacterium moorei F0204 RepID=E7MKT9_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 42.2
  • Coverage: 147.0
  • Bit_score: 117
  • Evalue 1.00e-23
PTS system fructose IIA component {ECO:0000313|EMBL:EFW25364.1}; TaxID=706433 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Solobacterium.;" source="Solobacterium moorei F0204.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.2
  • Coverage: 147.0
  • Bit_score: 117
  • Evalue 1.40e-23
PTS system transporter subunit IIA similarity KEGG
DB: KEGG
  • Identity: 39.0
  • Coverage: 146.0
  • Bit_score: 103
  • Evalue 4.30e-20

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Solobacterium moorei → Solobacterium → Erysipelotrichales → Erysipelotrichia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 435
ATGATTGGTGTAATTTTAAGTGGGCATGGCCGCTTTGCGGAAGGGATGCTCAGTAGTTTGGAGATGATTGCAGGGAAGAGTGAAGCGCTAGAAGCCATCAACTTTTTGGAAAGTGACAGTACGGATGATCTTGAAAAGAAGATGTTAAGTGTCATCCAAGACTATAATGCGAAATACGATGGCGTCTTGGTGTGCTGTGATCTTTTAGGCGGTTCACCGTTCAAAACGGCCGCTACTTTATCTGTTCAAGAGCCTAATGTAAGTGTTGTGGCGGGGATCAACCTTGCATCCTGTTTGGAACTCTTGTTCATGCGTATGAACAGTACCGATGCCAGTGCATTGGCGGATGCTTTGATCAATGCGGATGCGAACCGTTTGCTTAAGTTCACTTTGCCCACTAAGAAAGAAGAAGTTGAAAGTGAGGATGGCATTTAA
PROTEIN sequence
Length: 145
MIGVILSGHGRFAEGMLSSLEMIAGKSEALEAINFLESDSTDDLEKKMLSVIQDYNAKYDGVLVCCDLLGGSPFKTAATLSVQEPNVSVVAGINLASCLELLFMRMNSTDASALADALINADANRLLKFTLPTKKEEVESEDGI*