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ACD6_102_6

Organism: ACD6

megabin RP 47 / 55 MC: 24 BSCG 45 / 51 MC: 21 ASCG 0 / 38
Location: 6777..7127

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SYZ2_ACILW (db=UNIREF evalue=4.0e-62 bit_score=239.0 identity=99.14 coverage=98.2905982905983) similarity UNIREF
DB: UNIREF
  • Identity: 99.14
  • Coverage: 98.29
  • Bit_score: 239
  • Evalue 4.00e-62
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 75.9
  • Coverage: 116.0
  • Bit_score: 187
  • Evalue 1.80e-45
TruB-C_2 (db=HMMPfam db_id=PF09157 from=60 to=114 evalue=4.4e-09 interpro_id=IPR015240 interpro_description=Pseudouridine synthase II, TruB, subfamily 1, C-terminal, bacterial-type GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 4.40e-09

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Taxonomy

Acinetobacter lwoffii → Acinetobacter → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 351
TTGGGTGAAGATATTGCCAAAGCACTGGGAACTTATGGCCATCTGACTTATCTGCACCGCATCAAAACCGGCCATTTTGATTTGATCCCGAGTTATACCATTGAATATCTTGAAAGCCTGAGCGAAGCAGAGCGTGATGCACTGTTGTTGCCGGCCTATGCACCGGTTGATCATTTTCCAAAAGTGCAGGTACCCGAAGGTCGTGCAGAATATTTTAGCCGCGGCATGGAAAGCAATATCGAACATGAAGCAGCTGAACAGGTGCTGGTTTTTGATGGCGAGAAATGTCTGGGGCTGGCAGAAATTACCGACAAAAAACGTCTGGTACCCAAACGCGTCCTGAACCTCTAA
PROTEIN sequence
Length: 117
LGEDIAKALGTYGHLTYLHRIKTGHFDLIPSYTIEYLESLSEAERDALLLPAYAPVDHFPKVQVPEGRAEYFSRGMESNIEHEAAEQVLVFDGEKCLGLAEITDKKRLVPKRVLNL*