ggKbase home page
Advanced Search
Search Help

ACD6_333_2 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) rbh KEGG
DB: KEGG 		100.0 311.0 606 4.40e-171 snt:SPT_0282
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG 		100.0 311.0 606 4.40e-171 snt:SPT_0282
DNA-directed RNA polymerase subunit alpha n=1 Tax=Streptococcus pneumoniae CCRI 1974 RepID=UPI0001AF465D (db=UNIREF evalue=2.0e-167 bit_score=591.0 identity=99.66 coverage=94.8717948717949) similarity UNIREF
DB: UNIREF 		99.66 94.87 591 2.00e-167 snt:SPT_0282
seg (db=Seg db_id=seg from=298 to=311) iprscan interpro
DB: Seg 		null null null null snt:SPT_0282
rpoA: DNA-directed RNA polymerase, alpha sub (db=HMMTigr db_id=TIGR02027 from=18 to=311 evalue=5.4e-159 interpro_id=IPR011773 interpro_description=DNA-directed RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMTigr 		null null null 5.40e-159 snt:SPT_0282
no description (db=HMMSmart db_id=SM00662 from=18 to=225 evalue=7.8e-92 interpro_id=IPR011263 interpro_description=DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HMMSmart 		null null null 7.80e-92 snt:SPT_0282
Insert subdomain of RNA polymerase alpha subunit (db=superfamily db_id=SSF56553 from=48 to=169 evalue=3.5e-46 interpro_id=IPR011262 interpro_description=DNA-directed RNA polymerase, insert domain GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350), Molecular Function: protein dimerization activity (GO:0046983)) iprscan interpro
DB: superfamily 		null null null 3.50e-46 snt:SPT_0282
no description (db=Gene3D db_id=G3DSA:2.170.120.12 from=48 to=168 evalue=1.1e-41 interpro_id=IPR011262 interpro_description=DNA-directed RNA polymerase, insert domain GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350), Molecular Function: protein dimerization activity (GO:0046983)) iprscan interpro
DB: Gene3D 		null null null 1.10e-41 snt:SPT_0282
RBP11-like subunits of RNA polymerase (db=superfamily db_id=SSF55257 from=4 to=226 evalue=2.0e-31 interpro_id=IPR009025 interpro_description=DNA-directed RNA polymerase, RBP11-like GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: superfamily 		null null null 2.00e-31 snt:SPT_0282
RNA_pol_A_CTD (db=HMMPfam db_id=PF03118 from=242 to=301 evalue=2.2e-27 interpro_id=IPR011260 interpro_description=RNA polymerase, alpha subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HMMPfam 		null null null 2.20e-27 snt:SPT_0282
RNA_pol_A_bac (db=HMMPfam db_id=PF01000 from=58 to=149 evalue=8.9e-25 interpro_id=IPR011262 interpro_description=DNA-directed RNA polymerase, insert domain GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350), Molecular Function: protein dimerization activity (GO:0046983)) iprscan interpro
DB: HMMPfam 		null null null 8.90e-25 snt:SPT_0282
C-terminal domain of RNA polymerase alpha subunit (db=superfamily db_id=SSF47789 from=243 to=309 evalue=4.4e-22 interpro_id=IPR011260 interpro_description=RNA polymerase, alpha subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: superfamily 		null null null 4.40e-22 snt:SPT_0282
no description (db=Gene3D db_id=G3DSA:1.10.150.20 from=242 to=310 evalue=3.1e-21) iprscan interpro
DB: Gene3D 		null null null 3.10e-21 snt:SPT_0282
RNA_pol_L (db=HMMPfam db_id=PF01193 from=23 to=223 evalue=9.1e-21 interpro_id=IPR011261 interpro_description=DNA-directed RNA polymerase, dimerisation GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350), Molecular Function: protein dimerization activity (GO:0046983)) iprscan interpro
DB: HMMPfam 		null null null 9.10e-21 snt:SPT_0282
RPOA_STRPN_P66708; (db=BlastProDom db_id=PD001179 from=251 to=297 evalue=6.0e-20 interpro_id=IPR011260 interpro_description=RNA polymerase, alpha subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: BlastProDom 		null null null 6.00e-20 snt:SPT_0282
RNApol_bact_RpoA (db=HAMAP db_id=MF_00059 from=1 to=311 evalue=36.102 interpro_id=IPR011773 interpro_description=DNA-directed RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HAMAP 		null null null 3.61e+01 snt:SPT_0282
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase UNIPROT
DB: UniProtKB 		100.0 311.0 606 2.20e-170 A5M4Y1_STREE
DNA-directed RNA polymerase subunit alpha n=11 Tax=Streptococcus pneumoniae RepID=F3W7M5_STREE similarity UNIREF
DB: UNIREF90 		99.7 null 604 1.50e-170 snt:SPT_0282