ggKbase home page

gwa1_scaffold_145_35

Organism: GWA1_OD1_48_13

partial RP 29 / 55 BSCG 35 / 51 ASCG 8 / 38
Location: comp(30891..32063)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor {ECO:0000313|EMBL:KKU99116.1}; TaxID=1618666 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWC1_48_8.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 390.0
  • Bit_score: 745
  • Evalue 5.00e-212
RpoD subfamily RNA polymerase sigma-70 subunit KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 401.0
  • Bit_score: 379
  • Evalue 1.10e-102
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 383
  • Evalue 7.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC1_OD1_48_8_partial → Jorgensenbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1173
ATGAAAAAAAGACAAAAAAAGGTAAAGAAAATTAAAAAGGGAAAGAAAAAAACCTTGCGCAAGCCCGCGAGGGAAGCGGTGAGAAACAGAATCCTTAAAATCGGTGAGGATTATCTTGAAGCGCTTGAAGATTTAATAAGGCGCGGCCGGGGCCGGGGATTCGTGACCGACGCCGAAGTGCTGAATTACTTCCCGAAAATAGAGCAAAACCTCGGTTTCTTGGAGAAGGTCTACGACCGGCTGGAGAAAGAAGGCATTAAGGTCAGGGAATCCGGGTCAATCATCGCCGGCGGCGAAGAAATCAGCGCCAAGGAACTATCGGACGCGACGCGAATTGACCAGAATCTGCCGGATGCCGTTCAGATGTACCTGAAAGAAATCGGCCGGACGGCGCTTCTCACTTCCAAAGAGGAAAAAGAACTCGCCCGCCGGATTGAAAAAGGCGACGAGATTTCCAGAAAGAAACTTATTCAGGCGAACCTCCGGCTTGTCGTGTCGCTTGCCAAGCGCTACGTGAACCGCAGTCCGCATCTTTCCATTCTTGATTTGATTCAGGAGGGGAACATTGGCCTTTCCCGGGCGGTGGATAAATTCGATTACCGCAAGGGGTTCAAGTTTTCCACTTACGCCACCTGGTGGATTAGGCAGGCCATTACAAGGGCGCTTGCCGATTACTCGCGGACCATCCGCATTCCGGTGCATATGGTTGAGACCATCACCAAATACACCCAAACCAAACGCCGGCTGATGCAGGAGCTCGGCCGCGAACCGCTGCCTGAGGAAATCGCAACGGAAATGAATTTGGACGTGGAGAAAATCCGCTACATCCAGAAAATTTCCCAGGAAGTGATCTCCCTTGAATCGCCGGTTGGCGACGACGATGAGGATTCCACTCTCTCCGACTTCATCAAGGATGAAACGAGTTTAAGCCCAGACCAGCTTGCGAGCCAGGCGCTTTTGAAGGACCAAATCCGGGAAATTTTGGGCGACCTCACCGAACGGGAGCGGAAAATTCTTTCGATGCGGTTCGGTTTGGACGACAACATCACTCACACCTTGGAAGAAGTGGGAAAAGTTTTCGGCGTGACCCGCGAGCGCATCAGGCAGATTGAAGCGAAAGCTCTGGATAAAATCCGGCAGCATCATAAATCCAAAAAACTGGAAGGATATTAA
PROTEIN sequence
Length: 391
MKKRQKKVKKIKKGKKKTLRKPAREAVRNRILKIGEDYLEALEDLIRRGRGRGFVTDAEVLNYFPKIEQNLGFLEKVYDRLEKEGIKVRESGSIIAGGEEISAKELSDATRIDQNLPDAVQMYLKEIGRTALLTSKEEKELARRIEKGDEISRKKLIQANLRLVVSLAKRYVNRSPHLSILDLIQEGNIGLSRAVDKFDYRKGFKFSTYATWWIRQAITRALADYSRTIRIPVHMVETITKYTQTKRRLMQELGREPLPEEIATEMNLDVEKIRYIQKISQEVISLESPVGDDDEDSTLSDFIKDETSLSPDQLASQALLKDQIREILGDLTERERKILSMRFGLDDNITHTLEEVGKVFGVTRERIRQIEAKALDKIRQHHKSKKLEGY*