Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
sigma factor SigB regulation protein | similarity |
KEGG
DB: KEGG |
25.4 | 393.0 | 147 | 1.30e-32 | gpb:HDN1F_12190 |
seg (db=Seg db_id=seg from=260 to=272) | iprscan |
interpro
DB: Seg |
null | null | null | null | gpb:HDN1F_12190 |
seg (db=Seg db_id=seg from=9 to=30) | iprscan |
interpro
DB: Seg |
null | null | null | null | gpb:HDN1F_12190 |
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32) | iprscan |
interpro
DB: TMHMM |
null | null | null | null | gpb:HDN1F_12190 |
transmembrane_regions (db=TMHMM db_id=tmhmm from=251 to=273) | iprscan |
interpro
DB: TMHMM |
null | null | null | null | gpb:HDN1F_12190 |
seg (db=Seg db_id=seg from=491 to=504) | iprscan |
interpro
DB: Seg |
null | null | null | null | gpb:HDN1F_12190 |
seg (db=Seg db_id=seg from=279 to=297) | iprscan |
interpro
DB: Seg |
null | null | null | null | gpb:HDN1F_12190 |
HAMP (db=HMMPfam db_id=PF00672 from=256 to=321 evalue=2.4e-13 interpro_id=IPR003660 interpro_description=HAMP linker domain GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: signal transduction (GO:0007165), Cellular Component: integral to membrane (GO:0016021)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 2.40e-13 | gpb:HDN1F_12190 |
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase (db=superfamily db_id=SSF55874 from=397 to=530 evalue=2.3e-12 interpro_id=IPR003594 interpro_description=ATPase-like, ATP-binding domain GO=Molecular Function: ATP binding (GO:0005524)) | iprscan |
interpro
DB: superfamily |
null | null | null | 2.30e-12 | gpb:HDN1F_12190 |
no description (db=HMMSmart db_id=SM00304 from=273 to=325 evalue=3.1e-10 interpro_id=IPR003660 interpro_description=HAMP linker domain GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: signal transduction (GO:0007165), Cellular Component: integral to membrane (GO:0016021)) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 3.10e-10 | gpb:HDN1F_12190 |
HATPase_c (db=HMMPfam db_id=PF02518 from=444 to=527 evalue=7.6e-07 interpro_id=IPR003594 interpro_description=ATPase-like, ATP-binding domain GO=Molecular Function: ATP binding (GO:0005524)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 7.60e-07 | gpb:HDN1F_12190 |
HisKA_3 (db=HMMPfam db_id=PF07730 from=338 to=395 evalue=3.0e-06 interpro_id=IPR011712 interpro_description=Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO=Molecular Function: two-component sensor activity (GO:0000155), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Cellular Component: integral to membrane (GO:0016021), Molecular Function: protein dimerization activity (GO:0046983)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 3.00e-06 | gpb:HDN1F_12190 |
no description (db=Gene3D db_id=G3DSA:3.30.565.10 from=397 to=536 evalue=0.00071 interpro_id=IPR003594 interpro_description=ATPase-like, ATP-binding domain GO=Molecular Function: ATP binding (GO:0005524)) | iprscan |
interpro
DB: Gene3D |
null | null | null | 7.10e-04 | gpb:HDN1F_12190 |
HAMP (db=ProfileScan db_id=PS50885 from=273 to=325 evalue=10.149 interpro_id=IPR003660 interpro_description=HAMP linker domain GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: signal transduction (GO:0007165), Cellular Component: integral to membrane (GO:0016021)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.01e+01 | gpb:HDN1F_12190 |
Sigma factor SigB regulation protein {ECO:0000313|EMBL:EKD39380.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" |
UNIPROT
DB: UniProtKB |
100.0 | 549.0 | 1064 | 0.0 | K1Y927_9BACT | |
Similar to sigma factor SigB regulation protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJ10_9GAMM | similarity |
UNIREF
DB: UNIREF90 |
25.4 | null | 146 | 1.90e-32 | gpb:HDN1F_12190 |