ggKbase home page

ACD75_875_2 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
sigma factor SigB regulation protein similarity KEGG
DB: KEGG
25.4 393.0 147 1.30e-32 gpb:HDN1F_12190
seg (db=Seg db_id=seg from=260 to=272) iprscan interpro
DB: Seg
null null null null gpb:HDN1F_12190
seg (db=Seg db_id=seg from=9 to=30) iprscan interpro
DB: Seg
null null null null gpb:HDN1F_12190
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32) iprscan interpro
DB: TMHMM
null null null null gpb:HDN1F_12190
transmembrane_regions (db=TMHMM db_id=tmhmm from=251 to=273) iprscan interpro
DB: TMHMM
null null null null gpb:HDN1F_12190
seg (db=Seg db_id=seg from=491 to=504) iprscan interpro
DB: Seg
null null null null gpb:HDN1F_12190
seg (db=Seg db_id=seg from=279 to=297) iprscan interpro
DB: Seg
null null null null gpb:HDN1F_12190
HAMP (db=HMMPfam db_id=PF00672 from=256 to=321 evalue=2.4e-13 interpro_id=IPR003660 interpro_description=HAMP linker domain GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: signal transduction (GO:0007165), Cellular Component: integral to membrane (GO:0016021)) iprscan interpro
DB: HMMPfam
null null null 2.40e-13 gpb:HDN1F_12190
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase (db=superfamily db_id=SSF55874 from=397 to=530 evalue=2.3e-12 interpro_id=IPR003594 interpro_description=ATPase-like, ATP-binding domain GO=Molecular Function: ATP binding (GO:0005524)) iprscan interpro
DB: superfamily
null null null 2.30e-12 gpb:HDN1F_12190
no description (db=HMMSmart db_id=SM00304 from=273 to=325 evalue=3.1e-10 interpro_id=IPR003660 interpro_description=HAMP linker domain GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: signal transduction (GO:0007165), Cellular Component: integral to membrane (GO:0016021)) iprscan interpro
DB: HMMSmart
null null null 3.10e-10 gpb:HDN1F_12190
HATPase_c (db=HMMPfam db_id=PF02518 from=444 to=527 evalue=7.6e-07 interpro_id=IPR003594 interpro_description=ATPase-like, ATP-binding domain GO=Molecular Function: ATP binding (GO:0005524)) iprscan interpro
DB: HMMPfam
null null null 7.60e-07 gpb:HDN1F_12190
HisKA_3 (db=HMMPfam db_id=PF07730 from=338 to=395 evalue=3.0e-06 interpro_id=IPR011712 interpro_description=Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO=Molecular Function: two-component sensor activity (GO:0000155), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Cellular Component: integral to membrane (GO:0016021), Molecular Function: protein dimerization activity (GO:0046983)) iprscan interpro
DB: HMMPfam
null null null 3.00e-06 gpb:HDN1F_12190
no description (db=Gene3D db_id=G3DSA:3.30.565.10 from=397 to=536 evalue=0.00071 interpro_id=IPR003594 interpro_description=ATPase-like, ATP-binding domain GO=Molecular Function: ATP binding (GO:0005524)) iprscan interpro
DB: Gene3D
null null null 7.10e-04 gpb:HDN1F_12190
HAMP (db=ProfileScan db_id=PS50885 from=273 to=325 evalue=10.149 interpro_id=IPR003660 interpro_description=HAMP linker domain GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: signal transduction (GO:0007165), Cellular Component: integral to membrane (GO:0016021)) iprscan interpro
DB: ProfileScan
null null null 1.01e+01 gpb:HDN1F_12190
Sigma factor SigB regulation protein {ECO:0000313|EMBL:EKD39380.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" UNIPROT
DB: UniProtKB
100.0 549.0 1064 0.0 K1Y927_9BACT
Similar to sigma factor SigB regulation protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJ10_9GAMM similarity UNIREF
DB: UNIREF90
25.4 null 146 1.90e-32 gpb:HDN1F_12190