| Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
|---|---|---|---|---|---|---|---|
| 30S ribosomal protein S1 | similarity |
KEGG
DB: KEGG |
74.4 | 586.0 | 895 | 9.50e-258 | sat:SYN_03197 |
| 30S ribosomal protein S1 | rbh |
KEGG
DB: KEGG |
74.4 | 586.0 | 895 | 9.50e-258 | sat:SYN_03197 |
| SSU ribosomal protein S1P n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LSR9_SYNAS (db=UNIREF evalue=0.0 bit_score=841.0 identity=75.66 coverage=92.2204213938412) | similarity |
UNIREF
DB: UNIREF |
75.66 | 92.22 | 841 | 0.0 | sat:SYN_03197 |
| seg (db=Seg db_id=seg from=19 to=29) | iprscan |
interpro
DB: Seg |
null | null | null | null | sat:SYN_03197 |
| seg (db=Seg db_id=seg from=263 to=275) | iprscan |
interpro
DB: Seg |
null | null | null | null | sat:SYN_03197 |
| seg (db=Seg db_id=seg from=520 to=533) | iprscan |
interpro
DB: Seg |
null | null | null | null | sat:SYN_03197 |
| rpsA: ribosomal protein S1 (db=HMMTigr db_id=TIGR00717 from=68 to=577 evalue=1.5e-242 interpro_id=IPR018032 interpro_description=Ribosomal S1 synthesis/modification protein) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 1.50e-242 | sat:SYN_03197 |
| RIBOSOMALS1 (db=FPrintScan db_id=PR00681 from=98 to=112 evalue=3.6e-73 interpro_id=IPR000110 interpro_description=Ribosomal protein S1 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 3.60e-73 | sat:SYN_03197 |
| RIBOSOMALS1 (db=FPrintScan db_id=PR00681 from=387 to=405 evalue=3.6e-73 interpro_id=IPR000110 interpro_description=Ribosomal protein S1 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 3.60e-73 | sat:SYN_03197 |
| RIBOSOMALS1 (db=FPrintScan db_id=PR00681 from=347 to=366 evalue=3.6e-73 interpro_id=IPR000110 interpro_description=Ribosomal protein S1 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 3.60e-73 | sat:SYN_03197 |
| RIBOSOMALS1 (db=FPrintScan db_id=PR00681 from=269 to=290 evalue=3.6e-73 interpro_id=IPR000110 interpro_description=Ribosomal protein S1 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 3.60e-73 | sat:SYN_03197 |
| RIBOSOMALS1 (db=FPrintScan db_id=PR00681 from=212 to=232 evalue=3.6e-73 interpro_id=IPR000110 interpro_description=Ribosomal protein S1 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 3.60e-73 | sat:SYN_03197 |
| RIBOSOMALS1 (db=FPrintScan db_id=PR00681 from=183 to=200 evalue=3.6e-73 interpro_id=IPR000110 interpro_description=Ribosomal protein S1 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 3.60e-73 | sat:SYN_03197 |
| RIBOSOMALS1 (db=FPrintScan db_id=PR00681 from=166 to=182 evalue=3.6e-73 interpro_id=IPR000110 interpro_description=Ribosomal protein S1 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 3.60e-73 | sat:SYN_03197 |
| RIBOSOMALS1 (db=FPrintScan db_id=PR00681 from=142 to=161 evalue=3.6e-73 interpro_id=IPR000110 interpro_description=Ribosomal protein S1 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 3.60e-73 | sat:SYN_03197 |
| RIBOSOMALS1 (db=FPrintScan db_id=PR00681 from=80 to=98 evalue=3.6e-73 interpro_id=IPR000110 interpro_description=Ribosomal protein S1 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 3.60e-73 | sat:SYN_03197 |
| Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=486 to=603 evalue=1.7e-28 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 1.70e-28 | sat:SYN_03197 |
| Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=246 to=330 evalue=1.3e-27 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 1.30e-27 | sat:SYN_03197 |
| no description (db=HMMSmart db_id=SM00316 from=332 to=404 evalue=3.7e-27) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 3.70e-27 | sat:SYN_03197 |
| Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=320 to=405 evalue=4.2e-27 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 4.20e-27 | sat:SYN_03197 |
| Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=399 to=485 evalue=3.0e-26 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 3.00e-26 | sat:SYN_03197 |
| no description (db=HMMSmart db_id=SM00316 from=247 to=317 evalue=1.3e-25) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 1.30e-25 | sat:SYN_03197 |
| no description (db=HMMSmart db_id=SM00316 from=506 to=577 evalue=7.1e-24) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 7.10e-24 | sat:SYN_03197 |
| no description (db=HMMSmart db_id=SM00316 from=419 to=491 evalue=8.8e-23) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 8.80e-23 | sat:SYN_03197 |
| no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=508 to=603 evalue=5.5e-21 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) | iprscan |
interpro
DB: Gene3D |
null | null | null | 5.50e-21 | sat:SYN_03197 |
| S1 (db=HMMPfam db_id=PF00575 from=505 to=577 evalue=4.7e-20 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 4.70e-20 | sat:SYN_03197 |
| S1 (db=HMMPfam db_id=PF00575 from=247 to=317 evalue=1.1e-19 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.10e-19 | sat:SYN_03197 |
| no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=249 to=320 evalue=1.2e-19 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.20e-19 | sat:SYN_03197 |
| S1 (db=HMMPfam db_id=PF00575 from=331 to=404 evalue=1.3e-19 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.30e-19 | sat:SYN_03197 |
| Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=56 to=171 evalue=3.1e-19 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 3.10e-19 | sat:SYN_03197 |
| no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=329 to=406 evalue=6.2e-19 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) | iprscan |
interpro
DB: Gene3D |
null | null | null | 6.20e-19 | sat:SYN_03197 |
| no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=416 to=493 evalue=3.4e-18 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) | iprscan |
interpro
DB: Gene3D |
null | null | null | 3.40e-18 | sat:SYN_03197 |
| S1 (db=HMMPfam db_id=PF00575 from=418 to=490 evalue=1.0e-17 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.00e-17 | sat:SYN_03197 |
| Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=149 to=229 evalue=1.9e-15 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 1.90e-15 | sat:SYN_03197 |
| TEX PROTEIN-RELATEDTRANSCRIPTION ACCESSORY PROTEIN (S1 RNA BINDING DOMAIN) (db=HMMPanther db_id=PTHR10724 from=242 to=369 evalue=1.6e-14) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 1.60e-14 | sat:SYN_03197 |
| S1 (db=HMMPfam db_id=PF00575 from=78 to=144 evalue=8.9e-11 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 8.90e-11 | sat:SYN_03197 |
| S1 (db=HMMPfam db_id=PF00575 from=167 to=228 evalue=1.8e-08 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.80e-08 | sat:SYN_03197 |
| no description (db=HMMSmart db_id=SM00316 from=78 to=145 evalue=4.9e-06) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 4.90e-06 | sat:SYN_03197 |
| no description (db=HMMSmart db_id=SM00316 from=161 to=228 evalue=7.9e-06) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 7.90e-06 | sat:SYN_03197 |
| no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=75 to=147 evalue=1.7e-05 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.70e-05 | sat:SYN_03197 |
| S1 (db=ProfileScan db_id=PS50126 from=163 to=228 evalue=13.587 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.36e+01 | sat:SYN_03197 |
| S1 (db=ProfileScan db_id=PS50126 from=80 to=145 evalue=14.306 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.43e+01 | sat:SYN_03197 |
| S1 (db=ProfileScan db_id=PS50126 from=334 to=404 evalue=21.214 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 2.12e+01 | sat:SYN_03197 |
| S1 (db=ProfileScan db_id=PS50126 from=421 to=491 evalue=21.596 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 2.16e+01 | sat:SYN_03197 |
| S1 (db=ProfileScan db_id=PS50126 from=249 to=317 evalue=22.316 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 2.23e+01 | sat:SYN_03197 |
| S1 (db=ProfileScan db_id=PS50126 from=508 to=577 evalue=23.463 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 2.35e+01 | sat:SYN_03197 |
| Uncharacterized protein {ECO:0000313|EMBL:EKD38276.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" |
UNIPROT
DB: UniProtKB |
100.0 | 616.0 | 1214 | 0.0 | K1YM71_9BACT | |
| 30S ribosomal protein S1 n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LSR9_SYNAS | similarity |
UNIREF
DB: UNIREF90 |
74.4 | null | 894 | 1.40e-257 | sat:SYN_03197 |
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