| Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
|---|---|---|---|---|---|---|---|
| PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase | rbh |
KEGG
DB: KEGG |
48.8 | 811.0 | 774 | 2.50e-221 | daf:Desaf_1296 |
| PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase | similarity |
KEGG
DB: KEGG |
48.8 | 811.0 | 774 | 2.50e-221 | daf:Desaf_1296 |
| Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LQR9_DESBD (db=UNIREF evalue=0.0 bit_score=665.0 identity=44.68 coverage=99.5073891625616) | similarity |
UNIREF
DB: UNIREF |
44.68 | 99.51 | 665 | 0.0 | daf:Desaf_1296 |
| transmembrane_regions (db=TMHMM db_id=tmhmm from=32 to=54) | iprscan |
interpro
DB: TMHMM |
null | null | null | null | daf:Desaf_1296 |
| seg (db=Seg db_id=seg from=239 to=253) | iprscan |
interpro
DB: Seg |
null | null | null | null | daf:Desaf_1296 |
| no description (db=HMMSmart db_id=SM00267 from=490 to=663 evalue=9.2e-61 interpro_id=IPR000160 interpro_description=Diguanylate cyclase, predicted) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 9.20e-61 | daf:Desaf_1296 |
| Nucleotide cyclase (db=superfamily db_id=SSF55073 from=506 to=666 evalue=4.9e-54 interpro_id=IPR001054 interpro_description=Adenylyl cyclase class-3/4/guanylyl cyclase GO=Biological Process: cyclic nucleotide biosynthetic process (GO:0009190), Molecular Function: phosphorus-oxygen lyase activity (GO:0016849), Biological Process: intracellular signaling pathway (GO:0023034)) | iprscan |
interpro
DB: superfamily |
null | null | null | 4.90e-54 | daf:Desaf_1296 |
| no description (db=Gene3D db_id=G3DSA:3.30.70.270 from=492 to=671 evalue=4.5e-50) | iprscan |
interpro
DB: Gene3D |
null | null | null | 4.50e-50 | daf:Desaf_1296 |
| GGDEF (db=HMMPfam db_id=PF00990 from=501 to=657 evalue=5.0e-46 interpro_id=IPR000160 interpro_description=Diguanylate cyclase, predicted) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 5.00e-46 | daf:Desaf_1296 |
| EAL domain-like (db=superfamily db_id=SSF141868 from=678 to=810 evalue=2.1e-39) | iprscan |
interpro
DB: superfamily |
null | null | null | 2.10e-39 | daf:Desaf_1296 |
| GGDEF: diguanylate cyclase (GGDEF) domain (db=HMMTigr db_id=TIGR00254 from=497 to=664 evalue=2.2e-34 interpro_id=IPR000160 interpro_description=Diguanylate cyclase, predicted) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 2.20e-34 | daf:Desaf_1296 |
| EAL (db=HMMPfam db_id=PF00563 from=679 to=807 evalue=8.1e-31 interpro_id=IPR001633 interpro_description=Diguanylate phosphodiesterase, predicted) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 8.10e-31 | daf:Desaf_1296 |
| PYP-like sensor domain (PAS domain) (db=superfamily db_id=SSF55785 from=362 to=488 evalue=2.1e-23) | iprscan |
interpro
DB: superfamily |
null | null | null | 2.10e-23 | daf:Desaf_1296 |
| sensory_box: PAS domain S-box (db=HMMTigr db_id=TIGR00229 from=248 to=372 evalue=7.9e-21 interpro_id=IPR000014 interpro_description=PAS GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: signal transduction (GO:0007165)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 7.90e-21 | daf:Desaf_1296 |
| sensory_box: PAS domain S-box (db=HMMTigr db_id=TIGR00229 from=373 to=497 evalue=1.5e-19 interpro_id=IPR000014 interpro_description=PAS GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: signal transduction (GO:0007165)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 1.50e-19 | daf:Desaf_1296 |
| no description (db=Gene3D db_id=G3DSA:3.30.450.20 from=364 to=488 evalue=1.0e-18) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.00e-18 | daf:Desaf_1296 |
| PYP-like sensor domain (PAS domain) (db=superfamily db_id=SSF55785 from=236 to=360 evalue=1.1e-17) | iprscan |
interpro
DB: superfamily |
null | null | null | 1.10e-17 | daf:Desaf_1296 |
| SENSORY TRANSDUCTION HISTIDINE KINASE (DHKB) (db=HMMPanther db_id=PTHR23283:SF47 from=236 to=779 evalue=8.5e-17) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 8.50e-17 | daf:Desaf_1296 |
| SENSOR HISTIDINE KINASE-RELATED (db=HMMPanther db_id=PTHR23283 from=236 to=779 evalue=8.5e-17) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 8.50e-17 | daf:Desaf_1296 |
| no description (db=Gene3D db_id=G3DSA:3.30.450.20 from=239 to=363 evalue=4.8e-14) | iprscan |
interpro
DB: Gene3D |
null | null | null | 4.80e-14 | daf:Desaf_1296 |
| no description (db=HMMSmart db_id=SM00052 from=673 to=812 evalue=3.5e-13 interpro_id=IPR001633 interpro_description=Diguanylate phosphodiesterase, predicted) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 3.50e-13 | daf:Desaf_1296 |
| PYP-like sensor domain (PAS domain) (db=superfamily db_id=SSF55785 from=143 to=249 evalue=2.3e-11) | iprscan |
interpro
DB: superfamily |
null | null | null | 2.30e-11 | daf:Desaf_1296 |
| PAS_4 (db=HMMPfam db_id=PF08448 from=383 to=491 evalue=2.5e-11 interpro_id=IPR013656 interpro_description=PAS fold-4) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 2.50e-11 | daf:Desaf_1296 |
| Ammonium_transp (db=HMMPfam db_id=PF00909 from=1 to=83 evalue=3.1e-10 interpro_id=IPR001905 interpro_description=Ammonium transporter GO=Biological Process: transport (GO:0006810), Molecular Function: ammonium transmembrane transporter activity (GO:0008519), Cellular Component: membrane (GO:0016020), Biological Process: transmembrane transport (GO:0055085)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 3.10e-10 | daf:Desaf_1296 |
| Ammonium transporter (db=superfamily db_id=SSF111352 from=1 to=65 evalue=8.8e-10 interpro_id=IPR001905 interpro_description=Ammonium transporter GO=Biological Process: transport (GO:0006810), Molecular Function: ammonium transmembrane transporter activity (GO:0008519), Cellular Component: membrane (GO:0016020), Biological Process: transmembrane transport (GO:0055085)) | iprscan |
interpro
DB: superfamily |
null | null | null | 8.80e-10 | daf:Desaf_1296 |
| no description (db=HMMSmart db_id=SM00091 from=377 to=443 evalue=1.2e-08 interpro_id=IPR000014 interpro_description=PAS GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: signal transduction (GO:0007165)) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 1.20e-08 | daf:Desaf_1296 |
| no description (db=Gene3D db_id=G3DSA:3.30.450.20 from=117 to=238 evalue=1.1e-06) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.10e-06 | daf:Desaf_1296 |
| PAS (db=HMMPfam db_id=PF00989 from=253 to=349 evalue=6.1e-06 interpro_id=IPR013767 interpro_description=PAS fold GO=Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 6.10e-06 | daf:Desaf_1296 |
| no description (db=HMMSmart db_id=SM00091 from=252 to=319 evalue=7.8e-05 interpro_id=IPR000014 interpro_description=PAS GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: signal transduction (GO:0007165)) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 7.80e-05 | daf:Desaf_1296 |
| sensory_box: PAS domain S-box (db=HMMTigr db_id=TIGR00229 from=128 to=247 evalue=0.0012 interpro_id=IPR000014 interpro_description=PAS GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: signal transduction (GO:0007165)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 1.20e-03 | daf:Desaf_1296 |
| no description (db=HMMSmart db_id=SM00086 from=200 to=240 evalue=0.22 interpro_id=IPR001610 interpro_description=PAC motif GO=Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Biological Process: signal transduction (GO:0007165)) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 2.20e-01 | daf:Desaf_1296 |
| no description (db=HMMSmart db_id=SM00091 from=132 to=200 evalue=7.4 interpro_id=IPR000014 interpro_description=PAS GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: signal transduction (GO:0007165)) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 7.40e+00 | daf:Desaf_1296 |
| PAC (db=ProfileScan db_id=PS50113 from=199 to=249 evalue=8.86 interpro_id=IPR000700 interpro_description=PAS-associated, C-terminal GO=Molecular Function: two-component sensor activity (GO:0000155), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 8.86e+00 | daf:Desaf_1296 |
| PAC (db=ProfileScan db_id=PS50113 from=448 to=499 evalue=8.886 interpro_id=IPR000700 interpro_description=PAS-associated, C-terminal GO=Molecular Function: two-component sensor activity (GO:0000155), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 8.89e+00 | daf:Desaf_1296 |
| no description (db=HMMSmart db_id=SM00086 from=327 to=365 evalue=10.0 interpro_id=IPR001610 interpro_description=PAC motif GO=Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Biological Process: signal transduction (GO:0007165)) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 1.00e+01 | daf:Desaf_1296 |
| PAS (db=ProfileScan db_id=PS50112 from=250 to=319 evalue=10.361 interpro_id=IPR000014 interpro_description=PAS GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: signal transduction (GO:0007165)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.04e+01 | daf:Desaf_1296 |
| no description (db=HMMSmart db_id=SM00086 from=449 to=490 evalue=13.0 interpro_id=IPR001610 interpro_description=PAC motif GO=Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Biological Process: signal transduction (GO:0007165)) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 1.30e+01 | daf:Desaf_1296 |
| PAS (db=ProfileScan db_id=PS50112 from=375 to=445 evalue=14.514 interpro_id=IPR000014 interpro_description=PAS GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: signal transduction (GO:0007165)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.45e+01 | daf:Desaf_1296 |
| GGDEF (db=ProfileScan db_id=PS50887 from=532 to=665 evalue=33.814 interpro_id=IPR000160 interpro_description=Diguanylate cyclase, predicted) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 3.38e+01 | daf:Desaf_1296 |
| EAL (db=ProfileScan db_id=PS50883 from=674 to=812 evalue=39.207 interpro_id=IPR001633 interpro_description=Diguanylate phosphodiesterase, predicted) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 3.92e+01 | daf:Desaf_1296 |
| Uncharacterized protein {ECO:0000313|EMBL:EKD37095.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" |
UNIPROT
DB: UniProtKB |
100.0 | 812.0 | 1589 | 0.0 | K1Y2F3_9BACT | |
| Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Desulfovibrio africanus RepID=F3YYZ0_DESAF | similarity |
UNIREF
DB: UNIREF90 |
48.8 | null | 774 | 3.60e-221 | daf:Desaf_1296 |
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