ggKbase home page

gwc2_scaffold_133_22 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
Holliday junction resolvase similarity KEGG
DB: KEGG
33.3 135.0 97 2.40e-18 daf:Desaf_3376
Putative Holliday junction resolvase n=2 Tax=Lachnoanaerobaculum saburreum RepID=E6LRA3_9FIRM similarity UNIREF
DB: UNIREF90
37.0 0.0 99 9.00e+00 daf:Desaf_3376
(db=HMMPfam db_id=PF03652 from=5 to=137 evalue=1.3e-36 interpro_id=IPR005227 interpro_description=Resolvase, holliday junction-type, YqgF-like GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310), Biological Process: response to DNA damage stimulus (GO:0006974), Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 1.00e+00 daf:Desaf_3376
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=2 to=139 evalue=1.4e-35 interpro_id=IPR012337 interpro_description=Ribonuclease H-like domain GO=Molecular Function: nucleic acid binding (GO:0003676)) iprscan interpro
DB: superfamily
0.0 0.0 0 1.00e+00 daf:Desaf_3376
RNAse_H_YqgF: RNAse H-fold protein YqgF (db=HMMTigr db_id=TIGR00250 from=7 to=136 evalue=4.2e-22 interpro_id=IPR005227 interpro_description=Resolvase, holliday junction-type, YqgF-like GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310), Biological Process: response to DNA damage stimulus (GO:0006974), Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788)) iprscan interpro
DB: HMMTigr
0.0 0.0 0 4.00e+00 daf:Desaf_3376
no description (db=Gene3D db_id=G3DSA:3.30.420.140 from=2 to=139 evalue=3.5e-32 interpro_id=IPR006641 interpro_description=YqgF/RNase H-like domain GO=Biological Process: nucleobase-containing compound metabolic process (GO:0006139), Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788)) iprscan interpro
DB: Gene3D
0.0 0.0 0 3.00e+00 daf:Desaf_3376
HJR_YqgF (db=HAMAP db_id=MF_00651 from=4 to=139 evalue=20.883 interpro_id=IPR005227 interpro_description=Resolvase, holliday junction-type, YqgF-like GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310), Biological Process: response to DNA damage stimulus (GO:0006974), Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788)) iprscan interpro
DB: HAMAP
0.0 0.0 0 2.00e+01 daf:Desaf_3376
no description (db=HMMSmart db_id=SM00732 from=4 to=104 evalue=1.6e-20 interpro_id=IPR006641 interpro_description=YqgF/RNase H-like domain GO=Biological Process: nucleobase-containing compound metabolic process (GO:0006139), Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788)) iprscan interpro
DB: HMMSmart
0.0 0.0 0 1.00e+00 daf:Desaf_3376
Uncharacterized protein {ECO:0000313|EMBL:KKR06946.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;" UNIPROT
DB: UniProtKB
100.0 143.0 285 5.20e-74 A0A0G0N2C9_9BACT