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gwc2_scaffold_133_48 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
ribosomal large subunit pseudouridine synthase D similarity KEGG
DB: KEGG
42.2 313.0 215 2.80e-53 det:DET1375
Pseudouridine synthase n=2 Tax=Dehalococcoides mccartyi RepID=D2BIX0_DEHSV similarity UNIREF
DB: UNIREF90
43.0 0.0 213 8.00e+00 det:DET1375
RIBOSOMAL PSEUDOURIDINE SYNTHASE (db=HMMPanther db_id=PTHR10436 from=9 to=279 evalue=1.2e-57) iprscan interpro
DB: HMMPanther
0.0 0.0 0 1.00e+00 det:DET1375
(db=HMMPfam db_id=PF00849 from=95 to=233 evalue=1.9e-29 interpro_id=IPR006145 interpro_description=Pseudouridine synthase, RsuA and RluB/C/D/E/F GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 1.00e+00 det:DET1375
(db=HMMPfam db_id=PF01479 from=19 to=64 evalue=2.8e-10 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 2.00e+00 det:DET1375
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=86 to=297 evalue=3.4e-57 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: superfamily
0.0 0.0 0 3.00e+00 det:DET1375
Alpha-L RNA-binding motif (db=superfamily db_id=SSF55174 from=19 to=110 evalue=2.0e-09) iprscan interpro
DB: superfamily
0.0 0.0 0 2.00e+00 det:DET1375
S4 (db=ProfileScan db_id=PS50889 from=18 to=88 evalue=13.157 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: ProfileScan
0.0 0.0 0 1.30e+01 det:DET1375
rluA_subfam: pseudouridine synthase, RluA (db=HMMTigr db_id=TIGR00005 from=13 to=298 evalue=4.0e-69 interpro_id=IPR006225 interpro_description=Pseudouridine synthase, RluC/RluD GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: HMMTigr
0.0 0.0 0 4.00e+00 det:DET1375
no description (db=HMMSmart db_id=SM00363 from=18 to=82 evalue=4.7e-08 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: HMMSmart
0.0 0.0 0 4.00e+00 det:DET1375
similarity in-house
DB: RefSeq
null null null null det:DET1375
RNA pseudouridine synthase {ECO:0000313|EMBL:KKR06972.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;" UNIPROT
DB: UniProtKB
100.0 298.0 583 1.90e-163 A0A0G0QZJ3_9BACT