| Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
|---|---|---|---|---|---|---|---|
| ribosomal large subunit pseudouridine synthase D | similarity |
KEGG
DB: KEGG |
42.2 | 313.0 | 215 | 2.80e-53 | det:DET1375 |
| Pseudouridine synthase n=2 Tax=Dehalococcoides mccartyi RepID=D2BIX0_DEHSV | similarity |
UNIREF
DB: UNIREF90 |
43.0 | 0.0 | 213 | 8.00e+00 | det:DET1375 |
| RIBOSOMAL PSEUDOURIDINE SYNTHASE (db=HMMPanther db_id=PTHR10436 from=9 to=279 evalue=1.2e-57) | iprscan |
interpro
DB: HMMPanther |
0.0 | 0.0 | 0 | 1.00e+00 | det:DET1375 |
| (db=HMMPfam db_id=PF00849 from=95 to=233 evalue=1.9e-29 interpro_id=IPR006145 interpro_description=Pseudouridine synthase, RsuA and RluB/C/D/E/F GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 1.00e+00 | det:DET1375 |
| (db=HMMPfam db_id=PF01479 from=19 to=64 evalue=2.8e-10 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 2.00e+00 | det:DET1375 |
| Pseudouridine synthase (db=superfamily db_id=SSF55120 from=86 to=297 evalue=3.4e-57 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 3.00e+00 | det:DET1375 |
| Alpha-L RNA-binding motif (db=superfamily db_id=SSF55174 from=19 to=110 evalue=2.0e-09) | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 2.00e+00 | det:DET1375 |
| S4 (db=ProfileScan db_id=PS50889 from=18 to=88 evalue=13.157 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
0.0 | 0.0 | 0 | 1.30e+01 | det:DET1375 |
| rluA_subfam: pseudouridine synthase, RluA (db=HMMTigr db_id=TIGR00005 from=13 to=298 evalue=4.0e-69 interpro_id=IPR006225 interpro_description=Pseudouridine synthase, RluC/RluD GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: HMMTigr |
0.0 | 0.0 | 0 | 4.00e+00 | det:DET1375 |
| no description (db=HMMSmart db_id=SM00363 from=18 to=82 evalue=4.7e-08 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMSmart |
0.0 | 0.0 | 0 | 4.00e+00 | det:DET1375 |
| similarity |
in-house
DB: RefSeq |
null | null | null | null | det:DET1375 | |
| RNA pseudouridine synthase {ECO:0000313|EMBL:KKR06972.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;" |
UNIPROT
DB: UniProtKB |
100.0 | 298.0 | 583 | 1.90e-163 | A0A0G0QZJ3_9BACT |