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13_1_20cm_2_scaffold_12413_2

Organism: 13_1_20CM_2_Acidobacteria_55_9

partial RP 10 / 55 MC: 2 BSCG 4 / 51 ASCG 1 / 38
Location: 1376..2008

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZBZ1_TERRK similarity UNIREF
DB: UNIREF100
  • Identity: 39.6
  • Coverage: 197.0
  • Bit_score: 157
  • Evalue 1.30e-35
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:CDM65555.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphat UNIPROT
DB: UniProtKB
  • Identity: 43.9
  • Coverage: 198.0
  • Bit_score: 166
  • Evalue 4.00e-38
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 39.9
  • Coverage: 198.0
  • Bit_score: 157
  • Evalue 3.70e-36

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Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 633
ATGCCCAGAGAAATCACCTATAACTGGCTGGATCGGCCTGCGGAGCTGACAGCCCAGGAAGCGCTGTTTGTGTCGCGCCTGAAGGCCAATGAGGATGCGGCTTACGATGAACTGGTCCGCACCTATAGTGGGCCGATTTACCACGTTGCTTACCGCATGACCGGCGATGCCGCCGAAGCATCCGACGCCGTTCAAGACATCTTCCTTAAGATCTTCCGCAACATCGGAGGATTTAAGGGCGAAGCAGCTTTGAAGACGTGGATCTTCAAAATCGCATTCTCGGAAATCTTGAACCGCTTGCGGTGGTGGAAGCGCCGGCATCGGTACGCGACTTTATCGCTCGATGAATCACCTAACGGGAATACGCCGGGCGATGGTGTTGCCGACGCGGGTCCCACGCCTGAAGAAGTCCTTCAGGCAAAGGAACGAGAGGATGCAATCCAGCAAGCTCTGCGGAGACTCTCCCACGAACATCGGTCCATCATTGTCCTTCGCGATATCGAAGGTTTTTCTTATACCGAGATCGCGGACGTGTTGGGAATTTCGATGGGGACCGTCAAATCCAGGCTGGCGCGGGCTCGCGCCGATTTGAAGAAGTCGCTGATGCGCTATTTATCGGTGCGGTATCTTTGA
PROTEIN sequence
Length: 211
MPREITYNWLDRPAELTAQEALFVSRLKANEDAAYDELVRTYSGPIYHVAYRMTGDAAEASDAVQDIFLKIFRNIGGFKGEAALKTWIFKIAFSEILNRLRWWKRRHRYATLSLDESPNGNTPGDGVADAGPTPEEVLQAKEREDAIQQALRRLSHEHRSIIVLRDIEGFSYTEIADVLGISMGTVKSRLARARADLKKSLMRYLSVRYL*