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NECEvent2014_2_2_UNK

In projects: NECEvent2014_2_2
Displaying items 301-350 of 478 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_2_2_scaffold_589 172_002_scaffold_589
Genus: Enterobacter (50%)
6 8159 bp 55.23 723.05 94.53
NECEvent2014_2_2_scaffold_1012 172_002_scaffold_1012 7 2665 bp 53.81 4.17 94.56
NECEvent2014_2_2_scaffold_851 172_002_scaffold_851
Species: Facklamia hominis (100%)
1 3384 bp 34.43 9.97 94.59
NECEvent2014_2_2_scaffold_1964 172_002_scaffold_1964
Species: Acinetobacter sp. NIPH 973 (100%)
1 1316 bp 41.79 3.19 94.60
NECEvent2014_2_2_scaffold_1595 172_002_scaffold_1595
Species: Acinetobacter baumannii (100%)
2 1623 bp 39.49 13.12 94.64
NECEvent2014_2_2_scaffold_1751 172_002_scaffold_1751
Species: Eggerthella sp. HGA1 (100%)
3 1484 bp 53.03 2.83 94.81
NECEvent2014_2_2_scaffold_2397 172_002_scaffold_2397
Species: Enterobacter cloacae (100%)
2 1104 bp 56.16 4.89 94.84
NECEvent2014_2_2_scaffold_2672 172_002_scaffold_2672
Species: Enterobacter cloacae (75%)
4 1011 bp 54.90 4.45 94.96
NECEvent2014_2_2_scaffold_1386 172_002_scaffold_1386
Order: Clostridiales (100%)
3 1854 bp 41.75 12.54 94.98
NECEvent2014_2_2_scaffold_2025 172_002_scaffold_2025
Species: Enterobacter cloacae (66.67%)
3 1282 bp 54.91 3.74 95.01
NECEvent2014_2_2_scaffold_2005 172_002_scaffold_2005
Species: Enterobacter cloacae (50%)
2 1294 bp 58.35 4.40 95.05
NECEvent2014_2_2_scaffold_1146 172_002_scaffold_1146
Phylum: Firmicutes (66.67%)
3 2328 bp 35.78 14.63 95.10
NECEvent2014_2_2_scaffold_2652 172_002_scaffold_2652
Species: Acinetobacter baumannii (100%)
2 1018 bp 41.85 2.95 95.19
NECEvent2014_2_2_scaffold_2126 172_002_scaffold_2126
Species: Salmonella enterica (50%)
2 1232 bp 54.14 4.14 95.21
NECEvent2014_2_2_scaffold_1317 172_002_scaffold_1317
Species: Acinetobacter sp. NIPH 713 (50%)
2 1966 bp 33.32 7.32 95.37
NECEvent2014_2_2_scaffold_2558 172_002_scaffold_2558
Species: Enterobacter cloacae (100%)
2 1044 bp 60.44 5.17 95.40
NECEvent2014_2_2_scaffold_2635 172_002_scaffold_2635
Species: Eggerthella sp. HGA1 (100%)
2 1025 bp 59.32 3.51 95.41
NECEvent2014_2_2_scaffold_1230 172_002_scaffold_1230
Species: Enterobacter cloacae (66.67%)
3 2120 bp 58.11 4.17 95.52
NECEvent2014_2_2_scaffold_2274 172_002_scaffold_2274
Species: Enterobacter cloacae (66.67%)
3 1162 bp 60.41 4.00 95.53
NECEvent2014_2_2_scaffold_2272 172_002_scaffold_2272
Species: Citrobacter freundii (50%)
2 1162 bp 52.67 3.87 95.78
NECEvent2014_2_2_scaffold_529 172_002_scaffold_529
Species: Peptoniphilus harei (100%)
3 6380 bp 40.05 8.09 95.83
NECEvent2014_2_2_scaffold_2186 172_002_scaffold_2186
Species: Enterobacter cloacae (100%)
2 1205 bp 48.46 3.24 95.85
NECEvent2014_2_2_scaffold_658 172_002_scaffold_658 8 4710 bp 67.92 4.65 95.86
NECEvent2014_2_2_scaffold_2701 172_002_scaffold_2701
Species: Eggerthella sp. HGA1 (66.67%)
3 1004 bp 63.05 3.29 95.92
NECEvent2014_2_2_scaffold_915 172_002_scaffold_915
Species: Peptoniphilus harei (100%)
4 3024 bp 28.87 7.79 96.13
NECEvent2014_2_2_scaffold_2118 172_002_scaffold_2118
Species: Enterobacter cloacae (100%)
2 1235 bp 50.36 5.10 96.19
NECEvent2014_2_2_scaffold_1002 172_002_scaffold_1002
Order: Clostridiales (66.67%)
6 2712 bp 33.04 24.45 96.24
NECEvent2014_2_2_scaffold_2636 172_002_scaffold_2636
Species: Eggerthella sp. HGA1 (100%)
2 1025 bp 62.83 2.63 96.29
NECEvent2014_2_2_scaffold_2670 172_002_scaffold_2670
Species: Enterobacter sp. 35683 (50%)
2 1012 bp 55.43 3.11 96.34
NECEvent2014_2_2_scaffold_2458 172_002_scaffold_2458
Species: Peptoclostridium difficile (100%)
2 1080 bp 49.54 4.44 96.67
NECEvent2014_2_2_scaffold_2131 172_002_scaffold_2131
Species: Enterobacter cloacae (50%)
2 1230 bp 55.69 3.54 96.83
NECEvent2014_2_2_scaffold_1323 172_002_scaffold_1323
Species: Enterobacter cloacae (66.67%)
3 1954 bp 56.45 3.53 96.88
NECEvent2014_2_2_scaffold_1558 172_002_scaffold_1558
Species: Enterobacter cloacae (50%)
2 1659 bp 55.15 4.07 96.93
NECEvent2014_2_2_scaffold_2230 172_002_scaffold_2230
Species: Propionibacterium acidifaciens (100%)
1 1180 bp 62.12 883.22 97.12
NECEvent2014_2_2_scaffold_2691 172_002_scaffold_2691
Species: Enterobacter cloacae (100%)
2 1007 bp 58.09 3.57 97.12
NECEvent2014_2_2_scaffold_1573 172_002_scaffold_1573
Species: Acinetobacter ursingii (50%)
2 1640 bp 36.34 3.48 97.13
NECEvent2014_2_2_scaffold_2109 172_002_scaffold_2109
Species: Enterobacter cloacae (100%)
2 1238 bp 48.87 4.12 97.17
NECEvent2014_2_2_scaffold_2393 172_002_scaffold_2393
Species: Enterobacter hormaechei (50%)
2 1105 bp 52.76 4.07 97.19
NECEvent2014_2_2_scaffold_1763 172_002_scaffold_1763
Species: Gordonibacter pamelaeae (50%)
2 1475 bp 68.61 4.88 97.22
NECEvent2014_2_2_scaffold_1521 172_002_scaffold_1521
Genus: Enterobacter (66.67%)
3 1691 bp 54.46 4.70 97.22
NECEvent2014_2_2_scaffold_2674 172_002_scaffold_2674
Species: Eggerthella sp. HGA1 (50%)
2 1011 bp 66.77 3.26 97.33
NECEvent2014_2_2_scaffold_1903 172_002_scaffold_1903
Species: Peptoclostridium difficile (100%)
1 1364 bp 40.84 8.14 97.43
NECEvent2014_2_2_scaffold_2582 172_002_scaffold_2582
Species: Enterobacter cloacae (100%)
2 1036 bp 59.07 4.92 97.59
NECEvent2014_2_2_scaffold_2067 172_002_scaffold_2067
Species: Rahnella sp. WMR121 (100%)
1 1258 bp 35.77 4.29 97.77
NECEvent2014_2_2_scaffold_772 172_002_scaffold_772
Species: Finegoldia magna (100%)
4 3788 bp 32.92 21.30 97.81
NECEvent2014_2_2_scaffold_2113 172_002_scaffold_2113
Species: Enterobacter cloacae (66.67%)
3 1237 bp 56.51 4.61 97.98
NECEvent2014_2_2_scaffold_1181 172_002_scaffold_1181
Species: Enterobacter cloacae (100%)
3 2243 bp 61.48 3.48 98.04
NECEvent2014_2_2_scaffold_2480 172_002_scaffold_2480
Species: Acinetobacter baumannii (100%)
2 1071 bp 37.54 2.52 98.04
NECEvent2014_2_2_scaffold_2133 172_002_scaffold_2133
Species: Enterobacter cloacae (50%)
2 1230 bp 55.93 5.12 98.05
NECEvent2014_2_2_scaffold_906 172_002_scaffold_906
Species: Finegoldia magna (75%)
4 3104 bp 28.70 18.03 98.10
Displaying items 301-350 of 478 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.