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NECEvent2014_2_3_scaffold_2621_2

Organism: NECEvent2014_2_3_UNK

partial RP 8 / 55 BSCG 3 / 51 ASCG 2 / 38 MC: 1
Location: comp(963..1208)

Top 3 Functional Annotations

Value Algorithm Source
S1 RNA binding domain protein {ECO:0000313|EMBL:EFE58085.1}; EC=3.1.-.- {ECO:0000313|EMBL:EFE58085.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staph similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 81.0
  • Bit_score: 168
  • Evalue 3.10e-39
Ribonuclease R n=1 Tax=Staphylococcus epidermidis NIHLM039 RepID=J0FSS0_STAEP similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 81.0
  • Bit_score: 168
  • Evalue 2.20e-39
3'-to-5' exoribonuclease RNase R similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 81.0
  • Bit_score: 168
  • Evalue 6.20e-40

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Taxonomy

Staphylococcus epidermidis → Staphylococcus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 246
GGCATGCCATTACCTAAAAAGACATCATCACAACGACCTGCTCGTGAGAAAACCATTCAAGCTAAAACACGTGGCAAGTCGTTAGACCATACTAAAAGTGATCGTAATGGTAAAGGTAAAAAGAAAAAACGTAAGCAACGTAAAGGTAAAAATGCTCGTAAAAAAGATAAACAAGGTAATACGCACCACAAACCTTTTTATAAAGATAAAAGTGTGAAGAAAAAATCACGTCGAAAGAAAAAATAG
PROTEIN sequence
Length: 82
GMPLPKKTSSQRPAREKTIQAKTRGKSLDHTKSDRNGKGKKKKRKQRKGKNARKKDKQGNTHHKPFYKDKSVKKKSRRKKK*