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NECEvent2014_2_1_scaffold_1027_1

Organism: NECEvent2014_2_1_Clostridium_perfringens_29_4_partial

partial RP 33 / 55 MC: 2 BSCG 24 / 51 ASCG 9 / 38 MC: 2
Location: 2..343

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 n=6 Tax=Clostridium perfringens RepID=RL1_CLOP1 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 113.0
  • Bit_score: 224
  • Evalue 4.70e-56
rplA; 50S ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 113.0
  • Bit_score: 224
  • Evalue 1.30e-56
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 113.0
  • Bit_score: 224
  • Evalue 6.60e-56

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 342
GATATGATGGGTGTAGTTGGTAGATTAGGTAGAGTATTAGGACCAAAAGGTTTAATGCCAAACCCAAAATCAGGAACAGTTACATTTGACGTAGCTAACGCTATAAAAGAAATCAAAGCAGGTAAAGTTGAATATAGAGTAGATAAGACTGCTATAGTTCACTGCCCAATAGGAAAGAAATCTTTCGGAACTGAGAAATTAGTTGAAAACTTCAAAGCTTTAATGGACGCTTTAGTAAAAGCTAAACCAGCTGCTGCTAAAGGACAATACTTAAAATCAGTTTCAGTTTCAGCTACTATGGGACCTGGAGCTAAAGTTAACCCAGCTAAAGTTTTAGATTAA
PROTEIN sequence
Length: 114
DMMGVVGRLGRVLGPKGLMPNPKSGTVTFDVANAIKEIKAGKVEYRVDKTAIVHCPIGKKSFGTEKLVENFKALMDALVKAKPAAAKGQYLKSVSVSATMGPGAKVNPAKVLD*