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NECEvent2014_2_1_scaffold_1089_1

Organism: NECEvent2014_2_1_Clostridium_perfringens_29_4_partial

partial RP 33 / 55 MC: 2 BSCG 24 / 51 ASCG 9 / 38 MC: 2
Location: comp(2..313)

Top 3 Functional Annotations

Value Algorithm Source
PTS system mannose-specific transporter subunit IIC n=7 Tax=Clostridium perfringens RepID=H7CTS1_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 104.0
  • Bit_score: 192
  • Evalue 1.80e-46
PTS system mannose/fructose/sorbose family transporter subunit IIC similarity KEGG
DB: KEGG
  • Identity: 99.0
  • Coverage: 104.0
  • Bit_score: 191
  • Evalue 1.50e-46
PTS system, mannose/fructose/sorbose family, IIC component {ECO:0000313|EMBL:EDS81411.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 104.0
  • Bit_score: 191
  • Evalue 7.40e-46

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 312
GTGGATTTAAATATAATTCAAATAATATTAGTTATTATTATTGCATTCTTAGCTGGTATGGGAGGGATCCTAGACGAATTCCAATTTCATCAACCATTAGTTGCTTGTACTTTAATAGGTTTAGTTACAGGTAATTTAATACCATGTTTAATCCTAGGCGGTAGTCTTCAAATGATCGCTTTAGGTTGGGCAAACATAGGTGCTGCCGTAGCACCAGACGCAGCATTAGCATCTGTTGCAGCTGCAATTATCTTAGTTCTTAGTGGCGAAGGGCAAGCGGGAATATCTTCAGCTATCGCTATAGCAATTCCA
PROTEIN sequence
Length: 104
VDLNIIQIILVIIIAFLAGMGGILDEFQFHQPLVACTLIGLVTGNLIPCLILGGSLQMIALGWANIGAAVAPDAALASVAAAIILVLSGEGQAGISSAIAIAIP