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NECEvent2014_2_1_scaffold_1440_1

Organism: NECEvent2014_2_1_Clostridium_perfringens_29_4_partial

partial RP 33 / 55 MC: 2 BSCG 24 / 51 ASCG 9 / 38 MC: 2
Location: comp(1..210)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S20 n=8 Tax=Clostridium perfringens RepID=RS20_CLOP1 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 70.0
  • Bit_score: 133
  • Evalue 1.10e-28
rpsT; 30S ribosomal protein S20 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 70.0
  • Bit_score: 133
  • Evalue 3.20e-29
30S ribosomal protein S20 {ECO:0000255|HAMAP-Rule:MF_00500}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (stra similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 70.0
  • Bit_score: 133
  • Evalue 1.60e-28

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 210
ATGGCAAATATTAAATCAGCAAAGAAAAGAATAAAAGTTACTGAAAAGAAAACTTTAAGAAATAAGATGATTAAGTCAGCTCTTAAAACTGCTATAAAGAAGTTTGAAGTAGCTGTTGAAGCTAATAACAAAGCAGAAGCTGCAACTTTATACGTTGAAGCTGCTAGAGCTTTAGATATGTCTGCTTCTAAAGGAGTAGTTCATAAAAAC
PROTEIN sequence
Length: 70
MANIKSAKKRIKVTEKKTLRNKMIKSALKTAIKKFEVAVEANNKAEAATLYVEAARALDMSASKGVVHKN