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NECEvent2014_2_1_scaffold_1471_2

Organism: NECEvent2014_2_1_Clostridium_perfringens_29_4_partial

partial RP 33 / 55 MC: 2 BSCG 24 / 51 ASCG 9 / 38 MC: 2
Location: comp(179..859)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding response regulator n=2 Tax=Clostridium perfringens RepID=H7CUH2_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 226.0
  • Bit_score: 436
  • Evalue 1.60e-119
  • rbh
DNA-binding response regulator {ECO:0000313|EMBL:EDT71339.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D st similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 226.0
  • Bit_score: 436
  • Evalue 2.20e-119
DNA-binding response regulator similarity KEGG
DB: KEGG
  • Identity: 99.1
  • Coverage: 226.0
  • Bit_score: 434
  • Evalue 1.70e-119

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 681
ATGATTAAGATTTTGATTGTTGAAGATGAAGAAAAAATAGCAAGATTCATAGAATTAGAGTTAATTCATGAAGGATATAAAGTAATAAAAGCAGATAATGGGAGAACAGGTCTTGAAATTGCAGAGAGAGGAGAAGCTGACTTAATTATTCTAGATGTTATGCTTCCAGAAATTAATGGTCTTGAAGTATTAAGAAGAATCAGAAAGGTATCAGAAGTTCCTATTATAATGCTTACAGCAAGAGATGCTGTAATGGATAAGGTTTCAGGGCTAGATGCTGGAGCTGATGATTATATAACAAAGCCTTTTGCTATAGAGGAATTGCTTGCAAGAATAAGAACAGCTCTTAAAAAGAGAGTATTTACAGTGAAAAAAGATGAAGATGTAATAAGATGTGGATTATTAACCTTAGACAAGATGAGACATAAAGTAATGTATGGTGATACAGAAATAGAATTAACTAATAGAGAGTTTACTTTGTTGCAAATATTAATGGAAAACAAAAATATAGTATTAACTAGAGATGTGCTTATAGAAAAGGTATGTGGTTATAACTATGTTGGAGAAACAAATGTAATAGATGTTTACGTAAGATATTTAAGAACAAAGATTGACGATGTTTTTAAGGTTAAAATAATAAGTACAGTACGTGGTGTAGGATACGTAATAAAAGATGAGTAA
PROTEIN sequence
Length: 227
MIKILIVEDEEKIARFIELELIHEGYKVIKADNGRTGLEIAERGEADLIILDVMLPEINGLEVLRRIRKVSEVPIIMLTARDAVMDKVSGLDAGADDYITKPFAIEELLARIRTALKKRVFTVKKDEDVIRCGLLTLDKMRHKVMYGDTEIELTNREFTLLQILMENKNIVLTRDVLIEKVCGYNYVGETNVIDVYVRYLRTKIDDVFKVKIISTVRGVGYVIKDE*