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NECEvent2014_2_1_scaffold_738_2

Organism: NECEvent2014_2_1_Clostridium_perfringens_29_4_partial

partial RP 33 / 55 MC: 2 BSCG 24 / 51 ASCG 9 / 38 MC: 2
Location: comp(1125..1832)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protection-like tetracycline resistance protein n=5 Tax=Clostridium perfringens RepID=H7D055_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 235.0
  • Bit_score: 458
  • Evalue 3.10e-126
Tetracycline resistance protein TetP (TetB(P)) {ECO:0000313|EMBL:EDT14590.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 235.0
  • Bit_score: 458
  • Evalue 4.30e-126
tetP; tetracycline resistance protein similarity KEGG
DB: KEGG
  • Identity: 88.1
  • Coverage: 235.0
  • Bit_score: 412
  • Evalue 7.10e-113

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 708
ATGAAGAAAATAATTAATATAGGAATCGTAGCACACGTGGATGCAGGAAAAACAACTATAACAGAAAACTTATTATATTATAGTGGAGCTATAAAATCAGTTGGAAGAGTTGATTTAGGCAATACACAGACGGATTCTATGGAGCTTGAGCGTAAGAGAGGAATTACCATTAAATCGTCAACCATATCTTTTAATTGGAATAATGTTAAGGTGAATATTATTGATACTCCAGGACATGTGGATTTTATTTCGGAAGTTGAACGTTCATTAAATAGCTTAGATGGAGCAATACTAGTTATATCAGGAGTAGAGGGGATTCAGTCACAAACAAGAATATTATTTGACACATTAAAGGAGTTAAATATTCCAACAATAATTTTTGTAAATAAGCTAGATAGAATTGGGGCAAATTTCAACAAAGTATTTGAAGAAATAAAGAAGAATATGTCCAATAAAGTAGTTAGATTACAAGAAGTATATGATGTAGGAAGCAAAGCTGTTTATATAAAAAAACTATTTGATACATGCATAATAAATGATGATGCTATTAATGTTTTATCAGACTTAGACGAAGCATTTTTAGAAAGATATATTGGTGGAATAGAACCTGATAAAGAAGAAATACAAGAAAAGCTTTCATTATATGCAAGAGAAGGAAGTCTATATCCAGTATTTTGTGGTGCTGCAGCAATTGGACTTGGAATTTAA
PROTEIN sequence
Length: 236
MKKIINIGIVAHVDAGKTTITENLLYYSGAIKSVGRVDLGNTQTDSMELERKRGITIKSSTISFNWNNVKVNIIDTPGHVDFISEVERSLNSLDGAILVISGVEGIQSQTRILFDTLKELNIPTIIFVNKLDRIGANFNKVFEEIKKNMSNKVVRLQEVYDVGSKAVYIKKLFDTCIINDDAINVLSDLDEAFLERYIGGIEPDKEEIQEKLSLYAREGSLYPVFCGAAAIGLGI*