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NECEvent2014_2_1_scaffold_1796_2

Organism: NECEvent2014_2_1_Clostridium_perfringens_29_4_partial

partial RP 33 / 55 MC: 2 BSCG 24 / 51 ASCG 9 / 38 MC: 2
Location: 1074..1451

Top 3 Functional Annotations

Value Algorithm Source
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75) similarity KEGG
DB: KEGG
  • Identity: 99.2
  • Coverage: 126.0
  • Bit_score: 250
  • Evalue 3.30e-64
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 126.0
  • Bit_score: 250
  • Evalue 1.20e-63
tRNA dimethylallyltransferase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RT52_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 126.0
  • Bit_score: 250
  • Evalue 8.90e-64

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 378
ATGAATAATAATTTACTTATTATTGCTGGGCCAACAGCCGTAGGAAAAAGTGACCTTTCAGTAGATCTAGCAAAGAAGCTAAATGGTGAAATAATCTCTGTTGACTCTATGCAAATATATAAATACATGGATATAGGTTCAGCTAAAATTTCTAAGGAAGAAATGGGAGGCATTCCTCACTATTTAATAGATTTTGTTGATCCTAGTAAGGAGTTTAGTGTAGCTGAATTTAAAGACTTAGCTACAGAGAAAATTAAAGATATACAAAGTAGAGGGAAACTTCCTATATTAGTAGGGGGCACTGGACTATATATAAATTCAATCATATGCAATATGAATTTTGCAGAAAGTGATAAGGATGAGGAGTATAGAGAAGAG
PROTEIN sequence
Length: 126
MNNNLLIIAGPTAVGKSDLSVDLAKKLNGEIISVDSMQIYKYMDIGSAKISKEEMGGIPHYLIDFVDPSKEFSVAEFKDLATEKIKDIQSRGKLPILVGGTGLYINSIICNMNFAESDKDEEYREE