ggKbase home page

NECEvent2014_2_1_scaffold_1908_1

Organism: NECEvent2014_2_1_Clostridium_perfringens_29_4_partial

partial RP 33 / 55 MC: 2 BSCG 24 / 51 ASCG 9 / 38 MC: 2
Location: comp(767..1396)

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EDT27854.1}; EC=2.1.1.- {ECO:0000313|EMBL:EDT27854.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiac similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 209.0
  • Bit_score: 416
  • Evalue 1.70e-113
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RDQ3_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 209.0
  • Bit_score: 416
  • Evalue 1.20e-113
RNA methyltransferase similarity KEGG
DB: KEGG
  • Identity: 99.5
  • Coverage: 209.0
  • Bit_score: 416
  • Evalue 3.40e-114

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 630
ATAAACTCAAAGAAAACTAATGTAATATTAGGATTAGAAAGTAAAACTCTATGGGGAGAAGATACAATATCAGATTACATAGGAGACTTTAGATTCAACATATCTCCATTATCATTCTTCCAAGTAAATCCTATTCAAACAGAGGTTTTATATGGTAAGGCTTTAGAATATGCAAATCTTACAGGAAATGAAGAGGTATTTGATGCATATTGTGGAACAGGAACAATAACATTATTTCTATCACAAAAGGCTAAAAAAGTTTATGGAGTAGAAATAATTCCACAGGCCATAGATAATGCTTGGATAAATGCAAAGGAAAATAAAGTAGAGAATGTAGAATTCTTCGTTGGAGAATCAGAAGTGGTGATTCCAGACTTAATAAATAAGGGAGTAAAAGCTGATGTGGTAGTAGTAGACCCACCAAGAAAAGGGTGCGATAAAAAATTACTAGATGCCATAACAAATATAGATGCTAAAAAAATAGTATATGTAAGCTGTGATCCAAGTACATTAGGAAGAGACTTAAAAGTATTAGAAGAGAATGGCTATAAAACTTTAGAAGTTCAACCAGTGGATATGTTCCCAAACACTGCACATATTGAAAATGACGCTTTACTTATTAAGAAATAA
PROTEIN sequence
Length: 210
INSKKTNVILGLESKTLWGEDTISDYIGDFRFNISPLSFFQVNPIQTEVLYGKALEYANLTGNEEVFDAYCGTGTITLFLSQKAKKVYGVEIIPQAIDNAWINAKENKVENVEFFVGESEVVIPDLINKGVKADVVVVDPPRKGCDKKLLDAITNIDAKKIVYVSCDPSTLGRDLKVLEENGYKTLEVQPVDMFPNTAHIENDALLIKK*